Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGTTCGACGGTTTCCCACGCACCATTCCCCAGGCCGAAGCGCTGGTCAAAGCCGGCGTCGAGCTGGACCACGTGGTCGAGATCGCCGTGGATGACGAAGA GATCGTCCAGCGTATCGCCGGTCGCCGTGTGCACGAGGCCTCCGGCCGCGTCTACCACACCGTCTACAACCCGCCGAAAATCGCCGGCAAGGACGACATC ACCGGTGAGGACCTGATCCAGCGCAAGGACGACACCGAAGAAACCGTGCGTCATCGCCTGTCGGTCTACCACTCCCAGACCAAGCCGCTGGTGGCGTTCT ACCAGAACCTGGCCGCCAGCCAGGGCAAGCCGCAGTACAGCCATATCGCGGGCGTCGGTTCGGTCGAGTCGATCACCGGCAAGGTGCTCGAGGCGCTGAG CTGAGAAGTCGCATCGGCTTCATCTTCAACGGCCCGCTTGCGGGCCGTTGCTGTTTATAATGCGTCACTTTTTCAACCCTCTCTGCCTATGGAAACATCG
|
|
DNA Sequence for Gene |
>TO66_RS05770
ATGAGCACCTTGCTGGCCCTGGACACCGCGACTGAAGCCTGCTCCGTCGCCTTGCTGCACGACGGCAAGGTGACGAGCCATTACGAGGTGATCCCACGCC TGCACGCGCAGAAGTTGCTGCCGATGATCCAGCAGCTGCTGGCCGACGCCGGCACCAGCCTGCAGGCCGTCGACGCCATTGCCTTCGGCCGCGGGCCAGG GGCCTTTACCGGCGTGCGGATCGCCATCGGCGTGGTGCAGGGCCTGGCCTTCGCCCTGGAGCGGCCGGTGCTGCCGGTGTCGAACCTGGCGGTGCTGGCG CAACGGGCGTTGCGCGAACACGGCGCGACCCAGGTGGCGGCCGCCATCGATGCGCGAATGGATGAGGTGTATTGGGGCTGCTACCGCGAAGTGGCCGGCG AGATGCGCCTGGTAGGCGCCGAAGCGGTGCTGCCACCGCAAGCCGCCGCGTTGCCAACGGATGCCAGCGGCGACTGGTTCGGCGCGGGCACCGGTTGGGG TTATGCCGAGCGCATCGGCGTCAAGCCCGGCGCCCAGGATGCGGGCATGCTGCCTCACGCCGAAGACTTGCTGACCCTGGCGCGGTTTGCCTGGGAACGC GGCGAAGCGATTCCAGCCGATGAGGCGCAACCGGTGTATCTGCGGGACAAGGTCGCTACCCCCAAGGCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCACCGGCAACAGGGCGCGGTGCCAGCATGAAAGCCGCGTTTGGCCTGCCAATCGTCAGGTTTTCCAAGGAGTTTCCCGCCGTTTTTAAACCTTTTGTGT TTTCTGTGTTCTAGTTATCACTCGGGCATTTGCTTAGTCGGTCGTGTGCCGCTAAATTGCCATCATTGATACCGGGCATGTATTTATGCGCATAGACGGC ATTTCCTCTCAGTCCTACCCCATCAAGCGCAAGCCTCGCAAAGGCAATGTGCAGCTGGACGATACCCTCGAGGATATTGAAGCCGTCGAAGTCCAGGCCG AAGCCCCGGCGCAGGCCCGTACCTCTGCCGGTCGCACCGGCAATCTTCCCGCCCGTCCACAGGACATGATCTTCCAGCGCGCCATGAAGCGCAGCGTGGC CAATGCCCTGGCCAGCTACCTGACCACCGCCGGTTTCGTCGATTGGGATATGGAAGTGGTGGGTCTCGACCTGCACATCTGATGTCGTTGCCTTATTACC
|
|
Amino Acid Sequence |
>peptidase M22
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTSLQAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALERPVLPVSNLAVLA QRALREHGATQVAAAIDARMDEVYWGCYREVAGEMRLVGAEAVLPPQAAALPTDASGDWFGAGTGWGYAERIGVKPGAQDAGMLPHAEDLLTLARFAWER GEAIPADEAQPVYLRDKVATPKAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|