Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCACTGGTCTTCGGCTCGCCGCTGCACTGGGAGATGCCGCAGCTCAAGGGCTTCAACTTCGTCGGCGGCTGGGTGCTGATTCCGGAACTGCTGGCCCTG ACCCTGGCCCTGACCGTCTATACCGCGGCCTTCATCGCCGAGATCGTGCGTTCGGGGATCAAGTCGGTGAGCCACGGACAGACCGAGGCGGCCCGCTCCC TGGGCCTGCGCAACGGTCCGACCCTGCGCAAGGTGATCATCCCGCAAGCCTTGCGCGTGATCATTCCACCGCTGACCAGCCAATACCTGAACCTGGCGAA GAACTCGTCCCTGGCGGCCGGTATCGGCTACCCGGAAATGGTTTCGCTGTTCGCCGGCACGGTGCTCAACCAGACCGGACAGGCCATCGAGGTCATTGCC ATCACCATGAGCGTGTACCTGGCGATCAGTATCAGCATTTCCCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGAAACGCGC
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DNA Sequence for Gene |
>TO66_RS05295
ATGAGCACTCATATCTTCAAACCCGACATGCCCCCACCGAGCAGCAGCATCGGCGTCGTGGCCTGGATGCGGGCCAACATGTTCTCCAACTGGCTCAACA CCCTGTTGACGCTGTTCGCCTTCTACCTGATCTGGCTGGTCGTGCCGCCGCTGTTGCAGTGGGCGATCCTCGACGCCAACTGGGTCGGCACAAGCCGCGC CGACTGCACGAAGGAGGGCGCCTGCTGGGTGTTCATCCAGCAGCGCTTCGGCCAGTTCATGTACGGCTATTACCCGACCGAACTGCGTTGGCGCGTGGAC CTGACCGTGTGGCTGGCGGTGATCGGCGTGGCGCCGCTGTTCATCTCGCGCTTCCCGCGCAAGGCGATCTACGGCCTGGGTTTCCTGGTGCTGTACCCGA TCGTTGCCTACTTCCTGCTGCACGGCGGCCTGTTTGGCATGGCCAACGTTGCCACCAGCCAGTGGGGCGGCCTGATGCTGACCCTGGTGATCGCCACCGT CGGCATCGCCGGCGCCTTGCCCCTGGGCATCGTGCTGGCCCTGGGACGGCGCTCGAACCTGCCGGCGATCCGGGTGGTCTGCGTGACCTTCATCGAGTTC TGGCGCGGCGTGCCGCTGATCACCGTGCTGTTCATGTCTTCGGTGATGTTGCCGCTGTTCCTGCCCGAAGGCATGAACTTCGACAAGCTGCTGCGGGCGC TGATCGGCGTGATCCTGTTCCAGTCGGCCTATGTCGCCGAAGTGGTGCGCGGCGGTCTGCAGGCGATCCCCAAAGGCCAGTACGAAGCCGCGGCCGCGAT GGGCCTGGGCTACTGGCGCGCCATGGGCCTGGTGATCCTGCCGCAAGCCCTGAAGCTGGTGATTCCCGGCATCGTCAACACCTTCATCGCCCTGTTCAAG GACACCAGCCTGGTGATCATCATCGGCCTGTTCGACCTGCTCAACAGCGTCAAGCAAGCCGCCGCCGACCCGAAGTGGCTGGGCATGGCCACCGAAGGCT ATGTCTTCGCGGCCCTGGTGTTCTGGATTTTCTGTTTTGGCATGTCGCGCTATTCCATGCATCTGGAACGCAAGCTCGACACCGGCCACAAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCGCTACCTAATTTAGGAAGTTTTCCGATGAGCGAAGCAATCAAGAAGCCTGTGGGCCCTGAAGGCATTATTCAGATGCAGGGCGTGAACAAGTGGTAC GGCCAGTTCCATGTGTTGAAGGACATCAACCTCAACGTCCGGCAGGGCGAGCGCATCGTGCTGTGCGGGCCTTCGGGCTCGGGCAAGTCGACCACCATCC GCTGCCTGAACCGCCTGGAAGAACACCAGCAGGGGCGCATCGTGGTCGATGGCGTGGAGCTGACCAACGACCTCAAGCAGATCGAAGCGATCCGCCGCGA AGTCGGCATGGTGTTCCAGCACTTCAACCTGTTCCCGCACCTGACCATCCTGCAGAACTGCACCCTGGCGCCGATGTGGGTACGCAAGATGCCCAAGCGC AAGGCCGAGGAAATCGCCATGCATTACCTGGAGCGCGTGCGCATTCCGGAGCAGGCGAACAAGTACCCCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCG
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Amino Acid Sequence |
>amino acid ABC transporter permease
MSTHIFKPDMPPPSSSIGVVAWMRANMFSNWLNTLLTLFAFYLIWLVVPPLLQWAILDANWVGTSRADCTKEGACWVFIQQRFGQFMYGYYPTELRWRVD LTVWLAVIGVAPLFISRFPRKAIYGLGFLVLYPIVAYFLLHGGLFGMANVATSQWGGLMLTLVIATVGIAGALPLGIVLALGRRSNLPAIRVVCVTFIEF WRGVPLITVLFMSSVMLPLFLPEGMNFDKLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILPQALKLVIPGIVNTFIALFK DTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKLDTGHKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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