Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCCCTGACCGACCTGTTCATCGAGCTGGTGGAGCAGCGCTGCGCCGCCCATGGCCTGACGCTGGTGACCCCGCGCGAGCATGGCAAGCGCGGCAGCCAT GTCAGCTTCGAGCACCCTGAAGGCTATGCGGTGATCCAGGCGCTGATCGCCCGGGGCGTGATCGGCGACTACCGCGAGCCACGGATCATGCGTTTCGGTT TCACGCCGCTGTACACGCGTTTCAGCGAGGTCTGGGACGCGGTGCAGATCCTTGGCGAGATCCTCGATAACCGGACCTGGGCCGAGCCGCAATTCCAGAT TCGCCACAGCGTGACCTGAAAAAACCGATCCCTGTAGCCGCTGCCGAGCCATAGCGAGGCTGCGACAGGACCGAAGGTCCTCCAGCGGTCTCAAAATCCT GCGCCCCCTTCGGGGTCGATCGCAGCCTCGCTGGTGCTCGGCAGCGGCTACGGAATCCAAGCCATTACGTGTGCAAATAACAATAAAAGAGGCTCGCAAC
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DNA Sequence for Gene |
>TO66_RS03665
GTGACCACCACCAACCAGGGTTTCGCCGCGATATCCAATCGCGAACAGGGCTTGCGCCGCCAACTCAGTGCCGGGCAAATGAGCATGATCGCCATCGGCG GGGCGATCGGCACCGGCCTGTTCATGGGCAGCGCCTACGCCATCGGCTACGCCGGCCCCAGCGTGCTGCTCAGCTACGCCATCGGCGCGCTCATCACCTT GCTGCTGATGGGCTGCCTGGCGGAAATGACCGTGGCCCATTCCACTTCCGGTTCCTTCGGCGCCTACGCCGAGTTCTACATCAGCCCGCTGGCCGGGTTC CTGGTGCGCTACGCCTATTGGGCGGCCATCGTGCTGGCGGTCGGCGCCGAGGTCACGGCGATCGCGATGTACATGAAGTACTGGTTCGCCCATGTGCCGG AATGGGTGTGGATCGTCTCGTTCTCCAGCGTGCTGATCCTGCTCAACGCCATCAGCGTGAAGACCTTCGGCAACTTCGAGTACTGGTTCTCGACCATCAA GATCGCCGCCATCGTCGGCTTCATCATCCTGGCGGTGTACGTGGTATTCGGCTCCGGCAACGCCGACTACGGCCTGCACAACTACAGCGCCCATGGCGGC TTTTTTCCCAATGGTGTGCAGGGCATGTGGATCGCGGTGATCGTCTCGATCTTCAGCTACCTGAGCGTGGAGATGATCGCGGTGGCCGCCGGCGAGGCCG AGGACCCGCAGCAGGCGGTGAAAAAGGCCTTTCGCGCGACCATCGTGCGGCTGGTGGTGTTCTACCTGCTGACCCTGGCGCTGATGCTGGCCATCGTGCC CTGGGTCCAGGCCGGCAAGGCGCAGAGCCCGTTCGTCACGGTGATGCAGACCCTGGGCATTCCCGGTGCCACCGGGGTGATGAACTTCGTGATCCTGATC GCCGCGCTGTCGGCGATGAACAGCCAGCTGTACATCACCACGCGCATGATGTTCAGCCTGTCGCGCGGCGGTTACGCGCCCCGGTCCATGGGCGCGTTGA GCAAGAGCGGCATCCCGCTCAATGCCTTGCTGCTGTCCAGCTCGGGCATCGCCCTGGCGACCCTGGTCAACGTGCTGTACCCGGAAAGCTCGTTCACCCT GATGATGGCGATCTCGATGTTCGGCGCGATCTTCACCTGGTTCATGATCTTCCTCACCCACTATTGCTTCCGCCGCTACCACCAGCGCCATGGCGAGCAG CAGCTGTCGTTCCGCATGCGCCTGTTCCCCTGGAGCACCCTGCTGGGGCTGGTGCTGATGGGCGCGGTGATGATCACCACCTACTTCACCGAGGCGTTCA AGATGACCCTGGTGTTCGGCGCGCCGTTCCTGCTGATCCTGACGGCGGTGTACTTCGCCTGCTTCAGGAAGCCCCGGGCCGCCGCCGAGCTGAACCCGTC CAAGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGATCCGGGTGAAGCACGGCTCGGCAGCCGCTACAGGTTGCCGAGGCGGCAGTCGTGGCGAGCCTGTTCCAGGCGGGTTTCGAAATCTTCGAGGCGGG CGTGCAAGTGCTGCATGGCTTGGATCTGCCGCGTCAGCTCCTGCTTCTTCTCGGCCAGGGCCTGGCGCGCCAGTTCCCAGGGAAAGGCCTCGCCCCGATG CCGGGCGAACAGGGCCTGCAATTCCTTGAGCTTGAAACCCAGTTGCTGGGCGCACTTGATAAACATCAGGCGCTCGACGCTGTCCTGGTCGTAGAGGCGG TAGCTGCCCTGGCGTCGGGCCGGGGGCAGCAGGCCGATGGCTTCGTAATGGCGGATGCTTTTGACCGTGGTTCCGGACAACTGCGCGGCTTTGCCGATGT ACATGAACATGTCCTTTGCTCAAGGCGGGATAAAGCACGCAAGCCTCGGCGCAAAGGGCCGCCGCGTCAATCGGCGCCGAGCGCGGCGGCCTGCTCCAGC
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Amino Acid Sequence |
>amino acid permease
MTTTNQGFAAISNREQGLRRQLSAGQMSMIAIGGAIGTGLFMGSAYAIGYAGPSVLLSYAIGALITLLLMGCLAEMTVAHSTSGSFGAYAEFYISPLAGF LVRYAYWAAIVLAVGAEVTAIAMYMKYWFAHVPEWVWIVSFSSVLILLNAISVKTFGNFEYWFSTIKIAAIVGFIILAVYVVFGSGNADYGLHNYSAHGG FFPNGVQGMWIAVIVSIFSYLSVEMIAVAAGEAEDPQQAVKKAFRATIVRLVVFYLLTLALMLAIVPWVQAGKAQSPFVTVMQTLGIPGATGVMNFVILI AALSAMNSQLYITTRMMFSLSRGGYAPRSMGALSKSGIPLNALLLSSSGIALATLVNVLYPESSFTLMMAISMFGAIFTWFMIFLTHYCFRRYHQRHGEQ QLSFRMRLFPWSTLLGLVLMGAVMITTYFTEAFKMTLVFGAPFLLILTAVYFACFRKPRAAAELNPSKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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