Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TTCGGCCTGACCGTCGCAGAAGTGGTCGCCATGGGCCGCACACCGCACAAGGGCCTGTTCGACGGCGACACCGCGCAGGACCGCGAGATCGCCCGCCAGG CCCTGGAATCGGTGGGCCTGCTGGGCTTCGAGGCGCATGCCTTCGCGACGCTGTCCGGCGGCGAAAAGCAGCGGGTGATCCTGGCCCGCGCCCTGGCCCA GCAACCGCAACTGCTGATCCTCGACGAACCGACCAACCACCTCGACCCGCGCTACCAGCTGGAGCTGCTGCAACGGGTCAAGCGCCTGGGCATCGGCACC CTCGCCAGCATCCACGACCTGAACCTCGCCGCGGCCTTCTGCGACCGCCTGTACGTGCTCGATCACGGGCGCATCGTCGCCAGCGGCACGCCGGCCGAAG TCCTGACCCGCGAGCTGCTGCACCGGGTGTTCGGTGTCGAGGCGCTGGTCGACGAACACCCGCTGTCCGGCTACCCACGAATCACCTGGATAACCCAACC
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DNA Sequence for Gene |
>TO66_RS03060
ATGACCCCGCGCGTCTCACTCCACCGCCTGCTTCGCTCCGGCCTGCTGCTTGCCCTGTCGCTGACCGTCGCCCCGGCCTTCGCCGAAGCCACCCGCTACC CGCTGACCGTCCACAGCTGCAACCGCGAGGTGACCTTCAAGGAAGCGCCGAAGCACGCCCTGAGCCACGACATCAACATGACCCAGATGATGCTCGCCCT CGGCCTCAAATCGCGCATGGTCGGCTACAGCGGCATCAGCGGCTGGAAAGCGGTGACGCCCGAGATGCGCAACATCCTCGACGGCCTGCCGGAGCTGGCG GCCAAGTACCCGTCGGTGGAGACCCTGCTCGACGCCAACGTCGACTTCTTCTTCGCCGGCTGGGACTACGGCATGCGCGTCGGCGGCGACCTCACCCCGC AAACCCTGACGCCGCTGGGCATCAACGTGCTGGAGCTGACCGAGTCCTGCGCCTTCGTGATGAAGCGCCCGCCGGCGACCCTCGACGACACCTACAACGA CCTGCGCAACCTGGGCAAGATCTTCGACGTGCAAGACCGCGCCAACCAGTTGATCGCCGACATGCAGCAGCAGGTCGCGGCGATCCGGCAGGGCCTGCCC ACGGAAAAACCGCGGGTGTTCCTCTATGACAGCGGCGAGGACCGCGCCATGACCTCCGGCCGCCTGGGCATGCCGCAGGCGCTGATCGACGCCGCCGGCG GACGCAACATCCTCGATGACATCGACGCCAGCTGGACCCGGGTCAACTGGGAAACCGTGGTCGAACGCAATCCGCAGGTGATCGTGATCGTCGACTACAG CGAAATCAGCGCCGAGCAGAAACAGCAGTTCCTGCTGGACAACCCGGCGCTGCAATCGGTGGACGCGATCAGGAACCAGCGCTTTATCGTGATCCCCTAC GTGCAGGCCACGCCGGGCATCGACAACGTCGAGGCGGTGGAAACCCTGGCCAAGGGTTTCCACGGCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGATCGTCGTTATGCCGGCTTGCTCATCGTCCTCGGCGCCCTGCTGCTGGCCTCCTGCGTGCTGTCCCTGGGCTTCGGCTCGGCGCGGGTGCCGGTGGA CGTGGTGTGGCGCATCCTGCTGCACAAGACCCTGGGCCTGGGCGAAGTGGACTGGAGCACCGGCCAGGAACACATCGTCTGGCTGATCCGCGTGCCACGC ATGTTGCTCGGCGCCCTGGTCGGCGCCGGGCTGGCGCTGATCGGCGCGGTGCTGCAAGCGGTGACGCGCAACCCGCTGGCCGATCCGCACCTGCTCGGCG TGACGTCCGGCGCCACCCTGGGCGCGGTGATCGTGGTGCTGCATGTGGGGGAAATCGTCGGCCTGCTGACCCTGCCCATCGCCGCCTTCATCGGCGCCCT GGCGAGCATGCTGCTGGTGCTCGGCATCGCCGCGCGCCATGGCCGGCTCGACAGCGACCGCCTGCTGCTGTGCGGGGTGGCGGTGTCGTTCGTGATGATG
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Amino Acid Sequence |
>iron ABC transporter substrate-binding protein
MTPRVSLHRLLRSGLLLALSLTVAPAFAEATRYPLTVHSCNREVTFKEAPKHALSHDINMTQMMLALGLKSRMVGYSGISGWKAVTPEMRNILDGLPELA AKYPSVETLLDANVDFFFAGWDYGMRVGGDLTPQTLTPLGINVLELTESCAFVMKRPPATLDDTYNDLRNLGKIFDVQDRANQLIADMQQQVAAIRQGLP TEKPRVFLYDSGEDRAMTSGRLGMPQALIDAAGGRNILDDIDASWTRVNWETVVERNPQVIVIVDYSEISAEQKQQFLLDNPALQSVDAIRNQRFIVIPY VQATPGIDNVEAVETLAKGFHGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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