Pseudomonas sp. ML96, IP89_RS22215

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_46, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCTGGCCCAGCACAGCAACGGCATGCTCAGCCGTCTGCGCCCCGATCAACTGGAAGACCATCCCCTACCCGGCCCGCCCGGCCGCGGCGCCATCCTCAT GCGTTTCGGCGAGGGCGCGGACGCCCTGGTGGTGCTGAACCTGCACCTGGCGCTGGGCGCGCGCACCCGTACCCGCCAGCTGGCCTACGTGCGTGAGCTG ATCGCGGGGCAGCGCCATGTGGTGCTGATGGGCGACATGAACACCCATGCCGTCGACCTGCTGCAGAACTCGCCGCTGCGTGACCTCGGCCTGGTCGCAC CGCAGGTCGAAGCGACCTTCCCCAGCTGGCGCCCGCAGCGCTGCCTCGATCATATTCTGCTCAGCCCGGAACTGGTGCTGGAGCGGGTCGAGGTGCTCAG CCAGCCGATTTCCGACCATTTGCCGGTGGCGGTGGATATCCGCCTACCGACCGGCAGCAACCTGCCTATGCTTTAGTGGCTTTGCCACTGGATCGCCACC
DNA Sequence for Gene
>IP89_RS22215
ATGACCGATGAAGCCCAGCGCTGGAAAGCCAAGTATCTGGAGAGCCTCGAGCAGCAGGAGCTGGAGGAGAAGCGCTGGAACGAGCGCCTCGACCTGCTGC GCCGCGGCCTGGTACGCAGTTCGCTAGCCGCCGAGGGCAGCGACAAGGCGGTCGACCAATGCATGCAGGAACTGCGCGAGCTGATCCGTGGCGAGAAGAT GGACGCCGGCCTCTCCGCACTGATTCCGCGCCTGGAAAAGGCCGTGCTGGACTCCGAGCAGCGCCGCCAGCAGCGCATCGAACAGAACATCGCCGGCATC ACCGGGCTGACCCAGCAGCTGCTGGCGCTCGACCCGCCGCGCGAGGTGCGCAAGGCGCTCAAGCAGTTCTCCAAGCGCATCGACGAACGCGCCAGCCAGT CGCGTGAACTGCCGGCCCTGCTGGCCGAACTGAGCAGCCTGCAGGGCAAGACTCTTAGCGTGCTGGGCAGCGAGCCGGTGGAGCGCCCCGGCTTGTTGCA GCGCCTGTTCGGCAGCCGTGACGAGGCAGCGCCCGAGGCGCAGCCCGGTGAAGCTCCAGTGCAGGAGGCGAAAGCTCAGGTCGCAGCGCCTGATGTGGAC GAGGACGATGATGACGATCTGCCCGCGCCTGCCGCGCCCGTCGTCACCGCCCCGGCTGAGGAGCCTGCTGCGCCAATGGCCGCCGCGGCAGCCGCCGAGC CCAAGCTTTCCGCCCTCGTGCCGGAAGTGCTGGAGACCGCAGCCCAGCCGGCACCCACTGCTCGCCCTGCAGTAGTTGCTGCCCCGCTGGCCTCCAGTCT CGACAGCCTGCCGCTGGACGCGCGCATCATCACCGGCGATGGCGGCGACCCCGCCTTCGCCCTGCCCGAGCGCCCGGAGCCTGGCTACAGCGCCGTGGCG CCGCACATCGCCGGCAGCCTGCTCGGCCTGCTCGACGAGCTGGAGCTGCCGCTGCATCACCAGCCCCAGGGCGAGGCCCTGCGCGAGCGCCTGCAGGGCG GGTTGAACTGGTACGAGCTGGTGCCGCTGCTGGACGACCTGGTGGTGCTGGTGCTGGCTGTCACCGACAGCGGCCAGCGCGAATTCGCCGGCTACCTCAA ACAGCTCAACGAACGCCTGGCGGCTTTCCTCGGGACTCTCACCGAGGCCCACGAGGGCTACAGCGAGTCGGTGGAAAGCGCGCGCAACTTCAACCAGGAA CTGCGCGAGCAGGTCAGCGACCTGCAGGCCAGCGTGCAGGAGGCGGCCGATCTGAGCGGCCTCAAGCGCACCCTGGAGCAACGTCTGGAAGGCCTGCTGA GCACGGTCAGCAACCACCAGCGCCTGCGTGAGGGCCGCGAGGAAGAAGTGGCGCAGCGCCTGCAGGCGCTGTCGCAGAAGGTCGCCGAGATGGAGCAGGA GGCCCAGGGCTTCCGCGAGCACATCGAGGAGCAGCGGCAGAAGGCCCTCACCGATCCGCTCACCGGCCTGGCCAACCGCGCCGGCTGGGCCGAGCGCCTG GATCTGGAGCTGGCGCGCTGGCGCCGTTACGGCGGTGACCTGCTGCTGGCGGTGATGGACATCGACCACTTCAAGCGGATCAATGACGGCTACGGCCATC TGGCCGGCGACAAGGTGTTGAAGATCATCGCCGGTGAGCTGGCCAAGCGCCTGCGCAAGACCGACTTCCTCGCCCGCTTCGGCGGCGAGGAGTTCGTCCT GCTGGTGCCCAGCACGCCCCTGGACGGTGGCCAGCAGCTACTGGAGACGCTACGCACGGCGATCGAGTCGTGCCCCTTCCACTTCCGTGGCGAGCCGGTG ACCATCACCCTCTCCGCCGGTCTCACCGCCTTCGTCAGCGGCGAGAGCAGCGAGACGGCCTTCACCCGCGCCGACCAGGCCCTGTATCGGGCCAAGGGCG CGGGGCGCAACCGCATCGAGCTGGGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGCTGGGCAGATAGGGCTTCCAGTCTTCCGGGATACGCTCCAGGCGCGGGTAGCCCATGGCGTCCAGCTGCAGGTGCGAGAGCAGGAAGGGCGTGT GCCGCAGGTGCGCCGGCACGCTATGCAGCTCCGGTAGCCAGAGGCTGACATAAGCGGCCGCCGGGTCGTACTGGCGGGCCTGGCGCAGGGTGTTGGCCTG CTGCTGATGGCGCGGATCGCTGGCCACGCCGGCGAGGTAGGCCCAGTTGCCCCAGTTGCTCGCCGGGTCGTAGTCGAGCAGATGCTCCTCGAACCAGGCG GCGCCATGCCGCCAGTCCTGCTGCAGGTCGGCGATCAGGTAGCCGGCGGCGATCTGCCGGCCGCGGTTGGACAGGTAGCCGGTGGCCGCCAGTTCGCGCA TGCAGGCATCCACCAGCGGCATGCCGGTGCGGCCCTGGGTCCACAGCTCGAAGCGTTCGTCGCACTGGCGTGGCGCGCGCGCCGTGGCCTTGAGGCCGTC
Amino Acid Sequence
>diguanylate cyclase
MTDEAQRWKAKYLESLEQQELEEKRWNERLDLLRRGLVRSSLAAEGSDKAVDQCMQELRELIRGEKMDAGLSALIPRLEKAVLDSEQRRQQRIEQNIAGI TGLTQQLLALDPPREVRKALKQFSKRIDERASQSRELPALLAELSSLQGKTLSVLGSEPVERPGLLQRLFGSRDEAAPEAQPGEAPVQEAKAQVAAPDVD EDDDDDLPAPAAPVVTAPAEEPAAPMAAAAAAEPKLSALVPEVLETAAQPAPTARPAVVAAPLASSLDSLPLDARIITGDGGDPAFALPERPEPGYSAVA PHIAGSLLGLLDELELPLHHQPQGEALRERLQGGLNWYELVPLLDDLVVLVLAVTDSGQREFAGYLKQLNERLAAFLGTLTEAHEGYSESVESARNFNQE LREQVSDLQASVQEAADLSGLKRTLEQRLEGLLSTVSNHQRLREGREEEVAQRLQALSQKVAEMEQEAQGFREHIEEQRQKALTDPLTGLANRAGWAERL DLELARWRRYGGDLLLAVMDIDHFKRINDGYGHLAGDKVLKIIAGELAKRLRKTDFLARFGGEEFVLLVPSTPLDGGQQLLETLRTAIESCPFHFRGEPV TITLSAGLTAFVSGESSETAFTRADQALYRAKGAGRNRIELG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site