Pseudomonas sp. ML96, IP89_RS21495

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_46, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGCCCGCCACAGGCGAGCAATTTTCCACGGCGCAACCGCATCATCAGCGGCCTGTCGCTGGGCGTGCTGGTGGTCGAGGCCAGCCCCTCCAGCGGCTCG CTGATCACCGCGCGCCTGGCCGCCGAGCAGGGCCGCGAGGTCTATGCGATTCCTGGCTCGATCCACCATCCGGGCGCCCGCGGTTGTCATCAGCTGATCC GCGAGGGGGCGACCCTGGTGGAGAGCGTCGACGACATACTCCAGGCGCTGCGTGGCTGGCAGGCGGTCGCGCCGGCTGTGGTGGCCGAGCAGATCGACCA TCCGTTGCTGACGCAGTTGCGCGCCGCACCGCAGACCAGCGAGGGGCTGGCTCAGGCCTGTGGTCTGGAGTTGAGCGCCACTTTGATCGCCCTGACCGAG CTGGAGCTGGAAGGCCTGGTCGCCTGCGAGGCCGGGCGCTGGGTACACCGCGCGCCCTGAGCTGGGTACACTCGCCGCCAGAGAATCCATGGGGGTGAGC
DNA Sequence for Gene
>IP89_RS21495
ATGAGCGGTTGGCAGATACAGCGGGTGGCACGCGTGGTACGCGAAGGCGGGGTGATCGCTTATCCCACCGAGGCCGTCTGGGGCCTGGGCTGCGACCCAT GGAACGAGACCGCGGTAGATCGCCTGCTAGCGCTCAAGGAGCGCCCGGTGCACAAGGGCCTGATCCTGGTGGCGGACAGCATCGAGCAGTTCGATTTCCT TCTCGAAGACCTGCCCGAGCGCTGGATCGACCGCCTGGCCAGCACCTGGCCGGGGCCCAATACCTGGCTGGTACCGCACCAGGATCGCCTGCCACAGTGG ATCACCGGCCGCCACGACAGCGTCGCCCTGCGCGTCAGTGACCACCCGCTGGTACGAGACCTCTGCGCCCTCACCGGGCCACTGGTGTCCACCTCGGCCA ACCCGGCGGGTCGCCCCTCGGCGCGTTCGCGCCTGCGCGTCGAGCAGTACTTCCCCGGCCAGTTGGACGCCGTGCTCGGCGGCTCCCTGGGCGGGCGCCG TAATCCGAGCCTGATCCGCGACCTGCGTACGGGCGATGTAATCCGCCCATCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACGATCTGCTGCGCGTCGGAAAACTGTGTTGAAAGCGCCTTCGGAATGCTCATTGACCAATAGTCAACTCCGCTTCCTCAGCCGCTTTCGCCTTGCTT TTCTCTAGCTCGCGAGATCGTGGCGGCTAGTCACGGGATCAGGATGGTCGAGCCGGTGGTCTGCCGGCCGCTCAGCGCGTCCTGGGCCTGTGCTGCATCG GCCAGCGCGTAGCGGCGGCCGATCTCGACCTTGATCGCGCCACTGGCGATCAGGCCGAACAGCTCGTCGGCCATGGCCTGCAGGTTCTCGGCATTGCTGG CGTAGTGGCCCAAGGTCGGTCGGGTGACGTAGAGCGAACCCTTCTGCGCCAGCACGCCGAGGTTGACCCCGGTGACCGCGCCCGAGGCATTGCCGAAGCT GACCAGCAGGCCGCGCGGCGCTACGCAGTCCAGCGAGCGCTCCCAGGTGTCCTTGCCCACCGAGTCGTACACCACCGGGCACCTGGCCCCGCCGGTCAGC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MSGWQIQRVARVVREGGVIAYPTEAVWGLGCDPWNETAVDRLLALKERPVHKGLILVADSIEQFDFLLEDLPERWIDRLASTWPGPNTWLVPHQDRLPQW ITGRHDSVALRVSDHPLVRDLCALTGPLVSTSANPAGRPSARSRLRVEQYFPGQLDAVLGGSLGGRRNPSLIRDLRTGDVIRPS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site