Pseudomonas sp. ML96, IP89_RS19375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ML96 ML96_Contig_41, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCGACCCGAGCGCGAGGCGCAGCTGCGCAGCAGCCTGGACGTGGCGCTCGACCAGGAGTTTCGGGCTCTGCTGAGTAGCCCGGATCGCGGTGTGTTGG CGGGCGTCTGGTACCTCTCCGGGCAGGTCGAGGAAGGTCTTGGCCGGCCATTCCGTTATCTGCCCTGAATGTCGATTGTTTAGCTAAGCCTGAACTGAGC ATGCAAAGAATCCGATTTAACCGTGGTTAGCCGCCATGCGAGTCTGCCAAGCCATGAATCCCTGCACGCCGATGACCGCACCCGCACGCCGCCCCTTCCG GGCGCGGTTCGGCATCGGCGCGCTGCCCTCGCTCAACCCGGTGCTGGCCTTCTGGGCCCTCTGGCACTGCCGTCACGCCCGCCCACCGGACACTCGCCTC GCTGCCTGATAACGCGACCGCGCCAAGTACGCGGCTCGCCTGTCGATTTCTTGTCTGCCGTTCTTCAGACAGCGCGCCCTCTGGCGCAAAGCGAGGCCCC
|
|
| DNA Sequence for Gene |
>IP89_RS19375
ATGCGATTTGCCCCCGTCGAGGAAGCCACTGCCTTCCTCGCCGCCAACCCCGACATCGAGCTGATCGAGCTGTTCGTGCTGGACGCCAACGGCGTGCCGC GCGGCAAGCTGCTGCACCGCGAGGAGCTGCTGGCGCTGTACCAGAGCGGCCGACCGCTGCCCAGTACCATGCTTGGTCTGACCCTGCATGGCGAGGATGT CGAGAACTCCGGCCTGGTCTGGGAGGTGGGCGACATCGATTGCCGCGCCTATCCGCTGCCCGGCAGCCTGCAACGCCTGAGCTGGCGGCAGATTCCCACC GCCGCCGTGCAGGTTTCCATGCACCCCAGCGAAGGCCTGCCGGCCACCGTGGCCGATCCGCGCCACCTGCTGGTGCGGGTGATCGATGCGCTCAAGGCCG ACGGCTACCAGCCGGTGATGGCCTGCGAGCTGGAGTTCTACCTGCTCGACCAGAAACGCGACGCCCAGGGCCGCCCGCAACCGGCGCTGGACGCCGACGG CGGCCGCCCACGCAGTACCCAGGTGTATGGCCTGCGTGAGCTGGAGCAGATCGAGCCGTTCCTCGCCGACCTCTACGCAGCCTGCAAGGCCCAGGGCATT CCGGCGCGCACGGCGATTTCCGAATACGCGCCTGGCCAGGTGGAGATCACCCTGGAGCACGGCGATGCGCTCGAAGCCATGGATCAGGCGGTGCGCTACA AGCGCCTGGTCAAGGGCGTGGCGCACAAGCACGGCATGCAGGCCTGTTTCATGGCCAAGCCGTTCGACCATCTCGCCGGCACCGGCATGCATATGCATGT GAGCCTGGCGGACGAGCAGGGCAACAACCTGTTCGCCAGCGAGGCCAAGGAGGGCAGCGCGCTGCTGCGTCAGGCGGTCGGCGGCATGCTCGCCAGCCTG CTCGACTCGCTGCTGCTGTTCTGCCCCAACGCCAACTCCTACCGGCGCTTCCAGGCCAACAGCTACGCGCCGCTGGCGCCGACCTGGGGTGTGGACAACC GCACCGTGAGCCTGCGCGTACCGGGCGGCCCGGCGCATACCCGGCATGTCGAGCACCGCATCTGCGGCGCCGACGCCAATCCCTACCTGGCTGCCGCGGC GATTCTCGCCGGCATCCACCGTGGCCTGCGCGAGAACCTCGACCCGGGCGCGCCGGTGCAGGGTAACGGCTATGCCCAGGCCAAACAGTTCCTGCCCACC GAATGGTCCGCCTCGCTACACGCCCTGGAGCACTCCGCCTGGGCTCGCGATGCCTTCGGCGCGGAGTTCCTGCGCGTGTACCTGGCGGTGAAGCGCGCCG AGTACCGCCAGTTCATGGGCGAAGTGGGCGAGCAGGACTGGCGCTGGTACCTGACCAACGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TACAGAACAAGAACAGCCGCCGCGCCTGATGCCGGTGGCCACAGAGGAAAACAGCTATGAACGCAGCAACCCAACCCGTGATCGCCGCCGCCGAGCGGGC CAAGTCCTACTACAGCGCCACGCTGAACGAGGAAACCAACTACCCGACCCTGCAGGGCCAGGTCAGCGTCGACGTCGCCATCATCGGCGGCGGTTTCACC GGCGTCGCCACCGCGGTAGAGCTGGCCGAGCGCGGCCTCAAGGTAGCCATAGTCGAGACCAACAAGATCGGCTGGGGCGCCACCGGGCGCAACGGCGGCC AGGTCACCGGCAGCCTGTCGGGCGATGCGGCCATGCGCAAGCAGATGCGCAATACCCTGGGCGAGGAAGTCGACGACTTCATCTGGCACCTGCGCTGGCG TGGCCACGAGATCATCAAGAACCGCGTGGCCAAGTACGGCATCCAGTGCGACCTGCGCCACGGCCACCTGCACGCGGCGATGAAGCCCTCGCACATGGAC
|
|
| Amino Acid Sequence |
>glutamine synthetase
MRFAPVEEATAFLAANPDIELIELFVLDANGVPRGKLLHREELLALYQSGRPLPSTMLGLTLHGEDVENSGLVWEVGDIDCRAYPLPGSLQRLSWRQIPT AAVQVSMHPSEGLPATVADPRHLLVRVIDALKADGYQPVMACELEFYLLDQKRDAQGRPQPALDADGGRPRSTQVYGLRELEQIEPFLADLYAACKAQGI PARTAISEYAPGQVEITLEHGDALEAMDQAVRYKRLVKGVAHKHGMQACFMAKPFDHLAGTGMHMHVSLADEQGNNLFASEAKEGSALLRQAVGGMLASL LDSLLLFCPNANSYRRFQANSYAPLAPTWGVDNRTVSLRVPGGPAHTRHVEHRICGADANPYLAAAAILAGIHRGLRENLDPGAPVQGNGYAQAKQFLPT EWSASLHALEHSAWARDAFGAEFLRVYLAVKRAEYRQFMGEVGEQDWRWYLTNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|