Pseudomonas sp. ML96, IP89_RS18970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ML96 ML96_Contig_39, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATAGCGAAACACGAACTTCATCAGTCATCCCGGTGCTCTTGCAGGATCTGGCCGTTAGTGGCGTCCAGCTCCACGTCCCATTGCACGCCCTGAGCGTCGC GCACTTCGACCTGGTAGACGTAGCGACCGTGCTCTTGCTCAAGCTCGGTGTCTTCGATCTTGCCACCCGGGTGCTTGGCCAGCGCGGCCTCGTTGAGTTT CTCGAAGCTCTGGATGGTACCGGCATCGCGCAGTTTCAGCGCTTCGTCCGGACCCAAGTCACGAGCTTGAGCGATACCGGCGGTGGCGGCCAGGGCAGTA ATGGCGAAAAGGCTGGTCAGCTTGTTCATGGTGTTCTCCTCGGGGGTATCTGTTGTCTACGGTGCCCAAGATACTGGTGCCGACTTAATTCAAGCTGAAT CCAGCAGCGCCTCACAACTGACAGGACATTCACCGGCTGAAGCCGCTTGGCCTGCCGGAGCACGCCACTATAATCGCTGGCTTGCAATACGGAGCCGAGC
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| DNA Sequence for Gene |
>IP89_RS18970
ATGACCGCGATCCACATCAAATTCCCTGCCCTTAGCCTGCGCGCCGGCAAACGCGCCATCGCCCGCATTCGTGAACGTGGCCTGCAGCCGGCCGACGTCG GCATTCTGCCTGGCGCCGCAGGCGGCCCCAAGGGGCTCGGCATTCAGGGACTGGACCTCGCGCTGTTCGGCGACTGGCTGCCGCGAGCCCCGCGCGAGCG CACACTGATTGGTGCCTCGATCGGCTCCTGGCGCTTCGCTAGCGCCTGCCTGCCAGATGCCTGCGCCGGGCTTCTGCGCCTGGGCGAGCTGTATACCAGC CAGCGCTTCGCCAAGGGCGTGAGCATGGCCGAGGTCTCGCGCAGCTGCGTACAGCTGCTCGACGATCTACTGGAAGGACAAGACGCCGCGGTCCTGAACA ACCCGCTGTATCGCCTGAATATCGTGGTGGTGCGCAGCCATGGCCTGCTACAACACGACCATCGTGGCAAGTTGGGCCTGGGGCTGTCTTCGGTCATCGG CAACAACCTGCTCAGCCGCAGCCGCCTGTCCCGCCACTTTGATCGAGTGATCCTGCACGACAACCGGCAAACACCGCCACTGGCGACGCTGCAGGACTTT CCTTCGGACTTCCATACCCTGGCCGAAAGCAACCTGCGCCAGGCTCTGCTGGCTTCCGGCTCCATTCCCATGGTGATGGAGGCGATCCGCGAAATCCCTG GCCTGGAACCCGCCACCTACCGCGATGGCGGCCTGCTCGACTATCACCTGGACCTGCCTTATCTGGGCGACGATGTGGTGCTCTATCCGCACTTCACCGA CAAAGTCATCCCAGGCTGGTTCGACAAAGGGCTGCCTTGGCGCCGTGGCGACGCCACACGCCTGCAGGACGTGCTCCTGCTTGCTCCGTCGCGTGAGTAC CTCGCGAGCTTGCCCCACGGCAAGCTGCCAGACCGTAGTGACTTCAAGCGCTACCTGGGCGACGACGAAGGGCGCGAACGCTATTGGCGCAAAGCCATGG CCGAAAGCAGACGCCTCGGTGACGAATTCCTCGAGCTCGCCGATAGCGGCCGTCTGGCTGAGCGGCTACAAGCGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATATACGGCCCTCTGTTGCGGCCGCTCCAAGCCCCGCTGCTGGTAAACTGCGCGACTAGCTTCACGCCGTCCGCGGCCTATTCAGCAGAGCGTTTATCT TGGAACTGTTCAAAGAATTCACCTTCGAGTCCGCCCACCTCCTTCCCCATGTACCGGCCGGCCACAAGTGTGGCCGCCTGCACGGCCATTCCTTCCGTGC CGCCATCTATATCGAGGGTGAGGTTGATCCCCATACCGGCTGGATTCGTGACTTCGCCGAGATCAAGGCCATCTTCAAGCCGATCTATGAGCGTCTCGAC CACAACTATCTGAACGACATCCCCGGCCTGGAAAACCCCACTAGCGAGAACCTGGCGAAGTGGATCTGGCTGGAGCTCAAGCCGCTGCTTCCAGAACTGT CCCGCATTCGAGTACACGAGACCTGCACCAGTGGCTGCGAGTATCGCGGCGACTGATCTCTCTTCTTCCGAAAGCAAAAAGCCACCTATCGAGGTGGCTT
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| Amino Acid Sequence |
>hypothetical protein
MTAIHIKFPALSLRAGKRAIARIRERGLQPADVGILPGAAGGPKGLGIQGLDLALFGDWLPRAPRERTLIGASIGSWRFASACLPDACAGLLRLGELYTS QRFAKGVSMAEVSRSCVQLLDDLLEGQDAAVLNNPLYRLNIVVVRSHGLLQHDHRGKLGLGLSSVIGNNLLSRSRLSRHFDRVILHDNRQTPPLATLQDF PSDFHTLAESNLRQALLASGSIPMVMEAIREIPGLEPATYRDGGLLDYHLDLPYLGDDVVLYPHFTDKVIPGWFDKGLPWRRGDATRLQDVLLLAPSREY LASLPHGKLPDRSDFKRYLGDDEGRERYWRKAMAESRRLGDEFLELADSGRLAERLQAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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