Pseudomonas sp. ML96, IP89_RS18465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_37, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCCGGCCGGCAACTATGCACTGAAACTGTGCTTCGACGATGGCCACGACAGCGGCCTGTATACCTGGGACTACCTCTACCAGCTCGCCACCCGCCAGGA CGAGCTGTGGGCCGATTACCTGCAGCAGCTGGCCGCCGCCGGCAAGTCGCGCGACCCGAGCGAATCGGTCGTCCGTCTGATGCTCTGAGCCTGCCTGCGG AAAACTTTTCGGCGCGCTCTGGCACGCCACTTCCGTCATATTGCCTTCACGCCTAGAGCGCATTTTCTAATCGCGCTCGGCATACTCCCGCGCGCCGCAC AGCCGCCACTCGCGCGCTTGCGCAAAAATGGAAACTCGGGTAACCAAGGAACTGGCAGGTTCCATGCATTTGCCTTGAGCGAATGCGAAGAATGCGCGGA GCTCACTCCGCACCCGGCAAACCCGAGCAGTACCAGCCCTTCGCCCTGTGCCCTTCACACAGTCAGTTGGTATTCGCGTCAGGACAATGGAGCGTCGTAG
DNA Sequence for Gene
>IP89_RS18465
ATGGCTTACAAGAATAACGAAGACCTGCATCGCCAAGCCTCGGAAAGCACCTTGGGTCTGAACCCGGTGATCGGCTTGCGCGGCAAGGACCTACTCACTT CTGCCCGTATGGTGCTGGCCCAGGCCATCAAGCAACCCTTTCATAGCGCCAAGCACGTCACCCACTTCGCCTTCGAGCTGAAGAACGTCGTGCTCGGCCA GTCCGAGCTGGCGCCCGAGGCCGACGACCGTCGCTTCGCCGACCCGGCCTGGAGCCAGAACCCGCTGTACCGTCGTTATCTGCAGACCTACCTGGCCTGG CGCAAGGAGCTGCACGACTGGATCGAGGACAGCAACCTCACCGAACAGGACACCAGCCGCGGCCACTTCGTCATCAACCTGATGACCGAGGCCTTCGCGC CGAGCAACAGCATGGCCCACCCGGCGGCCGTCAAACGCTTCTTCGAGACCGGCGGCAAGAGCCTGCTCGACGGCCTCTCCCACTTGGCCAAGGACATCGT CAACAACGGCGGCATGCCCAGCCAGGTGAAGATGGACGCCTTCGAGGTCGGCAAGAACCTGGCCACCAGCGAAGGCGCGGTGGTGTTCCGCAATGACCTG CTGGAGCTGATCCAGTACAAGCCGATCACCGAGCAGGTGCACGAGCGCCCGTTGCTGGTGGTGCCGCCGCAGATCAACAAGTTCTACGTATTCGACCTGT CGCCGGAGAAGAGCGTCGCGCGCTTCCTCCTGCGCAACGGCGTGCAGACCTTCGTGGTGAGCTGGCGCAACCCGACCAAGGCGCAGCGCGAGTGGGGCCT GTCGACCTACATCGAGGCGCTCAAGGAAGCCGTCGACGCGGTCACCGCCATCACCGGCAGCAAGGACATCAACATGCTCGGTGCCTGCTCCGGCGGCATC ACCATCTCCTCGCTGCTCGGCCACTACGCCGCGCTCGGCGAGAAGAAGGTCAACTCGATGACCCTGCTGGTCAGCGTGCTCGACACCAAGCTCGACACCC AGGTCGCCCTGTTTGCCGACGAGAAGACCCTTGAGGCCGCCAAGCGCCGTTCCTACCAGTCCGGCGTGCTGGAGGGCAAGGACATGGCCAAGGTGTTCGC CTGGATGCGCCCCAACGACCTGATCTGGAACTACTGGGTCAACAACTACCTGATGGGCAAGGAGCCACCGGCCTTCGACATCCTCTACTGGAACAACGAC AACACCCGCCTGCCCGCCGCCCTGCACGGCGATCTGCTCGACCTGTTCAAGCACAACCCGCTGACTCGCTCCGGCGGCTTGGAGGTGTGCGGCACGCCGA TCGACCTGTCCAAGGTCAACCTCGACAGCTTCAGCGTGGCCGGCATCAACGACCACATCACGCCCTGGGACACGGTGTACCGCTCCGCCCTACTGCTCGG CGGCAACAGCCGCTTCGTGCTGTCCAACAGCGGGCATATCCAGAGCATTCTCAACCCGCCGGGCAACCCCAAGGCCACCTACTTCGAGAACGGCAAGCTG ACCAGCGACCCGCGCGCCTGGTACCACGACGCGCAGAAGAAGGAAGGCAGCTGGTGGCCGCAATGGCTGGAGTGGATCCAGCAGCGCTCGGGAGAGCAGC GCGAAACCGTCTTCAGCGTCGGCAGCAGCAAGTACCCGGCGATGGAGGCCTCGCCGGGCACCTATGTCCACGTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCACGGCGAAAAGCACTGGCCGGGCGCTGCCCCGGCCGGTTATCGTCGGAACCCCGGCGGCCAATCAAGATCATGGAATGAAGACCCGCGACCGCATCC TCGACTGCGCCCTGCAGCTGTTCAACGAACAGGGCGAACCCAACGTTTCCACCCTCGAAATCGCCACCGAACTGGGCATCAGCCCGGGTAATCTCTATTA CCACTTCCACGGCAAGGAGCCGCTGGTGATGGAGCTGTTCGAGCGCTTCCAGGCCGAGCTGGCGCCGCTGCTCGATCCGCCGGCCGAGGCCGAACTGGGC GCCGAGGACTACTGGCTGTTCCTGCATCTGATCGTCGAGCGCCTGGCCAGCTATCGCTTCCTGTTCCAGGACCTCTCCAACCTCTCCGGTCGCTTGCCCA AACTGAGCCGCGGCATTCGCCAGTGGCTCAACCTGCTCAAGCGCACCCTGGCCAGCCTGCTGGCCCGGCTCAAGGCGCTCGGCCAGCTGCGTAGCGACAC
Amino Acid Sequence
>poly(R)-hydroxyalkanoic acid synthase
MAYKNNEDLHRQASESTLGLNPVIGLRGKDLLTSARMVLAQAIKQPFHSAKHVTHFAFELKNVVLGQSELAPEADDRRFADPAWSQNPLYRRYLQTYLAW RKELHDWIEDSNLTEQDTSRGHFVINLMTEAFAPSNSMAHPAAVKRFFETGGKSLLDGLSHLAKDIVNNGGMPSQVKMDAFEVGKNLATSEGAVVFRNDL LELIQYKPITEQVHERPLLVVPPQINKFYVFDLSPEKSVARFLLRNGVQTFVVSWRNPTKAQREWGLSTYIEALKEAVDAVTAITGSKDINMLGACSGGI TISSLLGHYAALGEKKVNSMTLLVSVLDTKLDTQVALFADEKTLEAAKRRSYQSGVLEGKDMAKVFAWMRPNDLIWNYWVNNYLMGKEPPAFDILYWNND NTRLPAALHGDLLDLFKHNPLTRSGGLEVCGTPIDLSKVNLDSFSVAGINDHITPWDTVYRSALLLGGNSRFVLSNSGHIQSILNPPGNPKATYFENGKL TSDPRAWYHDAQKKEGSWWPQWLEWIQQRSGEQRETVFSVGSSKYPAMEASPGTYVHVR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site