Pseudomonas sp. ML96, IP89_RS18085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_37, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACATCCACAACGAGCTGGTTGGCCTGCTCTACCGCGATCATCGCGAGTGGCTGCTCGCCTGGCTGCGCAAGAGCCTGAGCTGCCCGCAGCGCGCCGCCG ACCTCGGCCAGGACACCTTCGTCCGCCTGCTCGGCCGCCCCGACCTGCAGGCGCCGCGCGAGCCCCGCGCCCTGCTCACCACCATCGCCCGCGGCCTGCT GATCGACCATTTCCGTCGCAGCGCCCTGGAACGCACCTACCTGGAAGAACTGGCCCAGCTGCCGGAGGCGCAACAGCCCAGCCTGGAAGAACAGGCCATG GCGCTGGATGCCCTGCGCGAGGTCGACCGCCTGCTCGGCCAGCTGTCGAGCAAGGCCCGCGCCGCGTTCCTCTACAACCGCCTCGACGGCCTCGGCCACG GCGAGATCGCCGAACGCCTCGGCGTGTCGGTGTCGCGCGTGCGCCAGTACCTGGCCCAGGGCCTGCGCCAGTGCTACATCGCCGTGCACGGTGAGCCGCA
DNA Sequence for Gene
>IP89_RS18085
ATGAGCGCGGTGCCGCTGCAGGTCCTCGACGAGGCCATCGGCTGGCAGCTGTGCCTCGGCTCCGGCGAGGCCAGCCCGCAGGACTATCAGGCCTTCTCCA TCTGGCTGGCGCAGCACCCGGAACACCTGCGGGTCTGGCAACAGCTCGGCGAGCTCGACCAGCAACTCGGCATCGCCGCCCCGGCACCGGCACGGCGCGC CCTGCTGGCGCGGCCGAACCGGCGCATCCCGCGCAGCGCACTCGGCCTGCTGCTGGCCCTGGGTCTGAGCCTGGGCCTGCTGAATACCCAGCGCCCGCTC AGCGACTACCTGGCCGACGAGCGCACCGGCAGTGGCGAGATTCTTGAACTACAGCTGCCCGACCATACCCAGGTCACGCTGAACAGCCGCAGCGCCATGG ACATCCAGTTCGACGAGCACGAGCGGCGGGTCTTCCTGCGCAGCGGCGAGATCCTGGTCGAGACCGCCCATGGCGATGCGCGGCCGTTCCTGGTGGTGAC CGAGCAAGGCAGCCTGCGCGCCCTCGGCACGCGCTTCCTGGTCCGCCGCGAAGGCGATGCCACGCGCCTGGTCGTGCTGCAGTCGGCGGTCGCCGCGCAT GCCCAGCAGCTGCCGGCAGAGCGGGTGATCGACGCCGGCCAGCAGGTGCTGATGCGCCGCGACGAGCTGGGCCAGGCGGCGCCAGCCCCGCTGGGCGCCG GCGCCTGGAGCAACGGCATGCTGGTGGCAGACAACCTGCGCCTGGCCGACCTGCTCGCCAGCCTGGACGAATATCGCCCTGGCTATCTGAGCGTCGACCC GCGCATCGCCGACCTGCGCATCAGCGGCAGCTTCCCGCTGCGCGACAGTGAACTGGCCCTGGCCGCACTGCCGCCCAGCCTTCCGGTGCGCATCGAGCGC TATACCAGTTGGTGGGTAAAAGTGGTGCCGGCGCAGCCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAAAAAATTTTCACTCGCCCCTGTCACTTTTCGATTCTGCTTCGGCAAAGGAGGAATTGAGAGACTTTCTCTTCTAGGAGCCGTTCGCAATGTCCCGCAC CCTGCACCTGCTGCGCCCCAGTCTGCTGGCCGCCGCCATCACCCTCTCCAGCCTGCCGACCCTGGCCCTCGCGCAGAGCTACCAGCTGCCGGCCGCGCCG CTGGCGAGCACCCTTAGCCGTATCGCCAGCGAAGCCGGTATCGTCCTGAGCATCGACCCGGCGCTGACCAGCGGCAAGACCGCCCAGCCGGTGCAGGGCG AGTACGAGCCCATGGCAGCCCTCAACGCGGCGCTGCAAGGCAGCGGCCTGCAACTGGTGCAGAGCACCGCCGGCAGCTACAGCCTGGCCCCCGCCGATGG CGTGACCCTGCCGAGCAGCGATATCAATGCCCAGGGCGAAGCCGACGGCAGCGCCGATGCCGGCTACCGCAGCGAGAACGTGAAGAACGTCGGCGCCCTC
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MSAVPLQVLDEAIGWQLCLGSGEASPQDYQAFSIWLAQHPEHLRVWQQLGELDQQLGIAAPAPARRALLARPNRRIPRSALGLLLALGLSLGLLNTQRPL SDYLADERTGSGEILELQLPDHTQVTLNSRSAMDIQFDEHERRVFLRSGEILVETAHGDARPFLVVTEQGSLRALGTRFLVRREGDATRLVVLQSAVAAH AQQLPAERVIDAGQQVLMRRDELGQAAPAPLGAGAWSNGMLVADNLRLADLLASLDEYRPGYLSVDPRIADLRISGSFPLRDSELALAALPPSLPVRIER YTSWWVKVVPAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site