Pseudomonas sp. ML96, IP89_RS15770 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTCAGCCCGAGTGAAGTGGTGGTGGTGTCGACCTTCCATATCGAACTGGACGGCGGTGGCGGAGACCTGCACATCACCATGCCGTATTCGATGATCGAG CCGATCCGCGAGATGCTCGACGCCGGTTTCCAGTCCGATGTGGACGACCAGGACGAGCGCTGGATCAAGGCGCTGCGCGAGGACATCCTCGACGTCAACG TGCCGCTCGGCGCCACCCTGGCGCGCCGCGAGCTGAAGCTGCGGGACATCCTGCACATGCAGCCCGGCGACGTGATTCCGGTGGAGCTGCCGGAGCAGAT GATCATGCGCGCCAACGGTGTGCCGGCCTTCAAGGTCAAGCTGGGCGCCCACAAGGGCAACCTGGCCCTGCAAGTTCTCGAGCCGGTGGAGCGCCTGCGC TAAGCGCGGTGTTGCGCCAGGCAGAAATAGATTAGGTGGTTGGCTGGGTAGCGTTCCCGGCTCTCCAGATACCAGATGGATAGCCAGCCGAGGTAGAGCG
DNA Sequence for Gene
>IP89_RS15770 |fliN
ATGGCAGACGAAAACGAAGGCACCAGCCCAGAAGAGCAGGCCCTGGCCGACGAGTGGGCCGCGGCCCTTGCCGAGGCAGGCGATGACGCCGGCCAGGCCG ATATCGATGCGCTGATGAACCAGGGCGCAGCGGCGGCGCCGGCGGCGCCACGCATGGCCATGGAAGAGTTCGGTGCGGCGCCCAAGCCGGGCAACGGTCC GGTGTCGCTGGACGGTCCGAACCTGGACGTGATCCTCGACATTCCGGTGTCCATCTCCATGGAAGTGGGCAGCACCGAGATCAGCATCCGCAACCTACTG CAGCTCAACCAGGGCTCGGTGGTGGAGCTGGACCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGTACCCTGATCGCCCACGGCGAGGTGGTGG TGGTCAACGAGAAGTTCGGCATTCGCCTGACCGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCATGATCCGTGCAATCTGCAGTCTGTTCCTGCTGGCGCCCTTGACGGTGCTGGCGGCCGAGCCCGCGACCAAGGCGGTCACCGCCCCCGTTGCCGGTA GTGATATTGGTGGCCAATTGGTCCAGCTGATGCTTGGCCTATTGCTGGTGGTGGGGCTGATCTTCGCCCTGGCCTGGTTGCTGCGCCGGGTGCAGCAGAT CGGTCCGCGCGGCAATCAGGCGATCAAGCTGGTATCCAGCCAGGCCCTGGGGCCGCGTGATCGTCTGTTGCTGGTACAGGTCGGCGGTGAGCAGATCCTG CTGGGCATCAGCGCCGGGCGTATCACTCCACTGCACGTGCTCAAGGAGCCGGTGAGCGTCGGTGATGCCCAACCTGCCGCACCGGAGTTCGCCCAGCGCT TGATGGAGCTGCTCGGCAAGGACCAGAAGGACCACAAGGAATGAGCGCCTGGCGCATTCTGCTGACCCTGTTGCTGGTCATCGCCGCCCCGCTGGCGTTT
Amino Acid Sequence
>flagellar motor switch protein
MADENEGTSPEEQALADEWAAALAEAGDDAGQADIDALMNQGAAAAPAAPRMAMEEFGAAPKPGNGPVSLDGPNLDVILDIPVSISMEVGSTEISIRNLL QLNQGSVVELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site