Strain | Pseudomonas sp. ML96 ML96_Contig_23, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAGGCGCCGTAGGGGTGCAGGTCTGGCTCCACGCCTTTCCATATGAAGTAGTCGTAGTCGAGCGGGGCGGGCAGCTCGTCGAGCAGCTCGAAGCCCGGC GTGCCCGGCACGCAGTGGCTGACCCAGGACAGATCGGCATTGGCCAGCGGCAATGGCTTGAGCATCTCCGCGTGACTCGGTACCACCCAGGCAGCCTGCG GGCTGTGCGCATCCTTGCTGCCCAGGCGCAGGCTGGCGCGTTCGGCCAGTTGGTTGAGAGCCGGGGCGATGGCATCGCCGCCGGGAACCGGCAGCTCGTC CGGGCATAGGGGAGTGAAACCCTTTTGCGCATCGACGTCGAAGCTGGCGATTTTCATCTTGGCATTCCTCGTTGCCGTGGAGATGGCTACATATTCCATC TGATGAAATAAGTTAGCAAGCGATTTTTCTCTCTGCGGGGTGAAACTCCAGGATTTATTCGTCAAGATGAAATAAGTCTGAAGATGACGAAGGAGAGGGC
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DNA Sequence for Gene |
>IP89_RS13760
ATGGCTTCCGCCGAAGTGCTGGCCGGGGTAGATATCGTGGCGCTACGCCTGGGCGAGGCGGGGCTGGAGCTGTTGCTGATCCGCCGCGCCCAGGCGCCGT TTGCTGGCGAATGGGCGCTGCCTGGCGTGTTGGTCAACGGCCGCAGCGCCGATGCCAGCCTGGACGCCGCCGCCGAGCGTGCGCTGCAGGACAAGGCGCG CATCGTGCCGGCCCACCTGGAGCAGGTGGCCACCGTGGGTAATGCGCTGCGCGACCCGCGTGGCTGGTCGCTGTCGACTTTCTATCTCGCATTGCTGGAG CCCGACGTCGAGCTGCAGGGTGATGACCTGCGTTTCGTTGCTCTGGCCGAAGTGCTGGCAGGGCGCCTGGCGTTGCCCTTCGACCACGCACAACTGGTGG CCCAGGCTGCCGAGCGCCTGGCCGGCAAGGCGGTGTACACCTCGCTGCCGCTGTATCTGCTGGCGCCGCGTTTCACCGTCACCGAGGCTCTGTCCGCGTT CCAGGCCTGCCTCGGCCAGGCGGTGCAGCACACCACTCTGCGCGGGCGCCTGGAGAAGATGAAGCAGCACGCCTGGATCGCCGACACCGGCGAGAAGAAC CAGCCGAAGATGGGCCGCCCGCAGAACCTGCTGGAGCATCGTCCGCAGGAGCCGGGTGGCTTCATCTTCGACCGCAGCGTGCTGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGCGTGAATCGACTACGCTGCGAGAAGTCCCGCAGCACAGTCGCCCGCTCCGGCGAGTTATGGAAGTCATCGCCATGCAGCTCCGTGTTCCTGCCCTGG CAGTCGTGTTCGGCTGCATCGCCATGCCCCTCGCCGCCGCTAGCCTCACGGCCGAGCTGGTGGATGCCCAGGGCCAGCCGCTGGCCAATGCGGTGCTCAG CCTCAAAGGCGCCGCTGCGCCTGCCCAGCCTGCGCCCGGCATCATGGACCAGCGCGACAAGCAGTTCATGCCCACCGTGCTGGCTGTACGCAGTGGTACC GCGGTGAAGTTTCCCAACAGCGACAACATCCGCCACCACGTTTATTCCTTCTCGCCGCCCAAGCGCTTCGAGCTGCGCCTGTACAAGGGCACGCCCAGCG ATCCGGTGCTGTTCGACAAGCCGGGTGTGGTGGTACTCGGCTGCAACATCCACGACTGGATGGTGGGCTACATCTATGTCACCGACGACCCCTGGTTCGC
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Amino Acid Sequence |
>NUDIX hydrolase
MASAEVLAGVDIVALRLGEAGLELLLIRRAQAPFAGEWALPGVLVNGRSADASLDAAAERALQDKARIVPAHLEQVATVGNALRDPRGWSLSTFYLALLE PDVELQGDDLRFVALAEVLAGRLALPFDHAQLVAQAAERLAGKAVYTSLPLYLLAPRFTVTEALSAFQACLGQAVQHTTLRGRLEKMKQHAWIADTGEKN QPKMGRPQNLLEHRPQEPGGFIFDRSVLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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