Pseudomonas sp. ML96, IP89_RS09180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGAAACTGGCCATCTTCGACGTCGACGGCGTACTGACCGACGGCAAGCTGTACTTCCTCGTCGACGGTAGCGAATTCAAGACCTTCAACACCCTGGACG GCCACGGCATCAAGATGCTGATCAACTCCGGCGTGCGCACCGCCATCATCAGCGGGCGCAAGACTCCGGTGGTCGAGCGTCGCGCACAGAGTCTCGGCAT CCAGCACCTGTACCAGGGCCGCGAGGACAAACTGGTGGTTCTCGATGAACTGCTCGGCGAGCTGGGCCTGAGCTACGAGCAAGTGGCCTATCTGGGCGAC GACCTGCCCGACCTGCCGGTAATCCGCCGCGTCGGCCTCGGCATGGCCGTCGCCAGTGCCGACAGCTTCGTCCGCCAGCACGCCCACGGCGTCACCCAGG CACGTGGCGGCGAAGGCGCCGCGCGCGAATTCTGCGAGCTGATCATGCGCGCCCAGGGCAGCCTGGAAGCCGCGCAGTCCGCCTACCTCTAGGATCAAGC
DNA Sequence for Gene
>IP89_RS09180
ATGAACGGCAAGCTGCGTAATTACCTGTTCGCCCTGCTGACCGTCGCTCTGGTCGGCGCCCTCGGCTACTGGAACATTCGCCCGGAAAGCTTCATGGAGC GCCAGGCGGCCGCCGAAGCCGACAACGCCATCGACTTCTATGTCACGGGCGCCAGCACCCAGCAGTTCCAGGCAGACGGCAAGCTGCACTACGAGATGAC TGCCGAGAAGCTCGAGCACATCAAGGCCACCGACATCACTCTGCTGGAAAAACCAGACCTGCAGCTGTACCGCGGCACCGCCTATCCCTGGCACGTGCGC AGCGACAAGGGCGAGGTCGGCCCCGAGGGCAAGCAGGTCGAACTGATCGACAACGTGCGCATCGCCCGCACCGATGCCAAGAACCGCCCCACTGTGATTA CCAGCAGCCGCGTCACCGTATTCCCCGATGAGGAATATGCGCAGACCCAGCAAGCCGTTAGAATCGAGGCCGCCAACGGGGTGACCACGGCACAGGGAAT GAAAGCGTACATGAACGACGGCAGGATCAACCTGCTGTCCAACGTAAGAGGCCAGCATGAGGTTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCTTCCCCCTACTGCTCTGCCTGGGCGCCGCGCTCGGAAGCGCCAGCGCATGGGCGCTGCCCAGCGACCGCGATCAGCCGATCCGCGTGCAGGCAGAC AGCGCAGAACTGGATGACAAGCAAGGCGTGGCCGTTTACCGCGGCGGCGTGGTGATTACACAGGGCACCCTGAAGATCACCGGCGACACCGTGACCATCA CCCAGGATGCCAACGGCGAGATCGAGGTCTTCACCTCGGTAGGCAGACCCGCCTACTACGAGCAGAAGCCGTCCGCCGACAAGGACATCGTCAAGGCCTA CGGCCTGACCATCCAGTACTACGCGACCAACGAGCGCATCGTACTGATCGACCAGGCCAAGGTGATCCAGCAGGGCAACACCTTCGAAGGCGAGAAGATC GTCTACGACACCCAGCGCCAGATCGTCAACGCCGGCCGCGCCACGGGCAGCAACGTATCGGTGCCGCGCCCGCGCATCGACATGATCCTGCAGCCACGCA
Amino Acid Sequence
>LPS ABC transporter permease
MNGKLRNYLFALLTVALVGALGYWNIRPESFMERQAAAEADNAIDFYVTGASTQQFQADGKLHYEMTAEKLEHIKATDITLLEKPDLQLYRGTAYPWHVR SDKGEVGPEGKQVELIDNVRIARTDAKNRPTVITSSRVTVFPDEEYAQTQQAVRIEAANGVTTAQGMKAYMNDGRINLLSNVRGQHEVR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site