Pseudomonas sp. ML96, IP89_RS06060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGGCCGAGTAAGCCCGCGTCGTGCGTATCAAGCTGATCGCCGTCGGCTCGCGCATGCCGCGCTGGGTGGAGGAGGGCTGGCAGGAGTACGTCAAGCGC CTGCCATCCGAGCTGCCGCTGGAGCTGGTGGAGATTCCGCTGACCACCCGTGGCAAGAACGCCGACGTCACCCGCCTGATCCGTCAGGAGGGCGAGGCGA TGCTGAGCAAGGTACAGCCCGGTGAACGCATAGTGACCCTGGAGGTCACAGGCAAGCCGTGGAGTACCGAGCAGCTGGCCGCCGAGCTGGAGCGCTGGCG CCTGGATGCGCGCAACGTCAACCTGATGGTCGGCGGCCCCGAGGGCCTGGCCCCGGAGGTCTGCGCGCGCAGCGAGCAGCGCTGGTCGCTGTCGCCGTTG ACCCTGCCGCATCCGCTGGTGCGCATTCTGGTCGGCGAACAGATCTACCGTGCCTGGACCGTGCTGTCCGGCCATCCGTACCACAAGTAAGCAGTAGTCG
DNA Sequence for Gene
>IP89_RS06060
ATGCCGCAACCCATACGCCTGAAGGACCACGAGAAGGACGCCCGCCTGGTGCGTCGTCGGGTCATTGTGGGCGGCATCACCGTGCTGCTGCTGACCTGCG TGCTGATCGCGCGCATGTATTACCTGCAGGTGATCCAGTACGAGCACCACTCGACGCTGGCGGAGAACAACCGCATCCACGTGCAGCCGATCCCGCCGAC CCGCGGCCTGATCTTCGATCGCAACGGGGTGATCATCGCCGACAACCGGCCGAGCTTCAGCCTGACCGTGACCCGCGAGCGCGCCGGCGACTGGCAGCAG GTGCTCGACGCGATCGTCGAGGTGCTGCAGCTGACGCCGGATGACCGCGCGCTGTTCGAGAAGCGCATGCGCCAGGGCCGTCGCCCGTTCGAGCCGGTGC CGGTGCTGTTCGAACTGACCGAGGAGCAGATCGCCCGCATCGCGGTGAACCAGTTCCGCCTGCCCGGCGTCGAGGTGGCTGCGCAGCTGGTGCGCCACTA CCCGCAGAAGGGCCACTTCGCGCATTCGGTCGGCTATGTCGGGCGAATCAACGAAAAGGAACTCAAGGAGCTCGACCCCACCGATTACGCCGGCACTCAC CACATCGGCAAGACCGGTATCGAGCGCTTCTACGAGGACCTGCTGCACGGCCAGGTCGGTTATGAGGAAGTCGAGACCAATGCCCGTGGCCGCGTGCTGC GGGTGCTCAAGCACACCGACCCGATCCCGGGCATGGACCTGACCCTGACCCTCGACGTGCGCCTGCAGGAGGCTGCCGAGCAGGCCCTGGGCGGCCGCCG TGGCGCGGTGGTGGCAATCGAGCCGTCCAGTGGCGACGTGCTGGCCATGGTCAGCCAGCCGAGCTTCGACCCCAACCCGTTCGTCACCGGTATCGGCTTC AAGGCCTATGCCGAGTTGCGCGACTCCATCGACCGGCCGCTGTACAACCGCGTGCTACGCGGCCTCTACCCGCCGGGCTCGACGGTCAAGCCGATGATCG CGGTGGCCGGCCTGGACGCCGGAGTGGTCACGCCGCAGACCCGGGTGTTCGATCCGGGCTACTACCAGCTGCCGGGCAACACCCACAAATACCGCAACTG GAATCGCACCGGTGACGGCTCGGTGAACCTGGAGTACGCCATCATGCGCTCCAACGACACCTACTTTTACGACCTCGCCCACAAGATGGGCGTGGACCGC ATGCACGACTACATGAGCCGCTTCGGCCTGGGTCAGAAGGTTTCGCTGGACATGTTCGAGGAGGCGCCGGGGCTGATGCCGTCGCGCGAGTGGAAGCGCG CGCGCTACCGCCAGTCCTGGTATCCGGGCGAGACGCTGATCCTCGGTATCGGCCAGGGCTACATGCAGACCACGCCGCTGCAGCTGGCCCAGGCGGTGAC CCTGATGGCTACGCGCGGCAAGTGGATTCGCCCGCACCTGCTCAAGCGCGCCGAGAACATGAGCCCGGCGGAGCTGATGGAGCAGGACCTGATGCCGCAT GTGCCGACCCCGCCGGACATCCAGCTGCGCGATCCGAAGTTCTGGGACTACAGCCGTGTCGGCATGGAAATGGTGATGCACGGCCCGCGCGGCACGGCGG CCAAGGTCGGCGCCACCTCGCTCTACCGCATCGCCGGCAAGAGCGGTACGGCGCAGGTGGTGGCGATCAAGCAGGGCGAGAAATACGACCGCAACAAGGT CGCCGAGCGCCATCGCGACCACGCCCTGTTCGTCGCCTTCGCCCCGGCCGAGGCGCCGAAGATCGCGGTATCGGTGATGATCGAGAACGGCGAGGGTGGC TCCAGCGTGGCCGCGCCGGTGGCCAAGCAGGTGATGGACGCCTGGCTGCTGGGAGAGGACGGTCAGCTCAAGCCCGAATATCGCCCGGCCGTGCCGACAA CCGAGGAGGCGAGTGCCACGCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGCCAGGAATTCGATCGCAACATCTCCCAGGAGGACGTGTTCAAGCGCCGCGCCACGCTGTTGCAGCGCCTGCACATCGACGGCTGGCTGCTGCTGAT CCTGCTGGCGCTGTGCGCCGGCAGCATGTTCATCCTCTATTCGGCCAGCGGCAAGAACTGGGACCTGGTGCTCAAGCAGGGCTCCTCGTTCGGCATCGGC CTGGTCGCCGCCATCGTCATCGCCCAGTTCGAGCCGCGTTTCATGGCGCGCTGGGTGCCACTGGCCTATGTGGCCGGCGTCGGTCTGCTGACCGTGGTCG AGATCATGGGCCACACGGCGATGGGCGCGACGCGCTGGATCAACATTCCCGGGGTGATCCGCTTCCAGCCCTCGGAATTCATGAAGATCATCATGCCGGC GACCATCGCCTGGTACCTGGCCCGGCACAACCTGCCGCCCAAGCTGAAGCACATTGCCATCAGTCTGGTGCTGATCCTGATCCCCTTCGTACTCATTTTG
Amino Acid Sequence
>penicillin-binding protein 2
MPQPIRLKDHEKDARLVRRRVIVGGITVLLLTCVLIARMYYLQVIQYEHHSTLAENNRIHVQPIPPTRGLIFDRNGVIIADNRPSFSLTVTRERAGDWQQ VLDAIVEVLQLTPDDRALFEKRMRQGRRPFEPVPVLFELTEEQIARIAVNQFRLPGVEVAAQLVRHYPQKGHFAHSVGYVGRINEKELKELDPTDYAGTH HIGKTGIERFYEDLLHGQVGYEEVETNARGRVLRVLKHTDPIPGMDLTLTLDVRLQEAAEQALGGRRGAVVAIEPSSGDVLAMVSQPSFDPNPFVTGIGF KAYAELRDSIDRPLYNRVLRGLYPPGSTVKPMIAVAGLDAGVVTPQTRVFDPGYYQLPGNTHKYRNWNRTGDGSVNLEYAIMRSNDTYFYDLAHKMGVDR MHDYMSRFGLGQKVSLDMFEEAPGLMPSREWKRARYRQSWYPGETLILGIGQGYMQTTPLQLAQAVTLMATRGKWIRPHLLKRAENMSPAELMEQDLMPH VPTPPDIQLRDPKFWDYSRVGMEMVMHGPRGTAAKVGATSLYRIAGKSGTAQVVAIKQGEKYDRNKVAERHRDHALFVAFAPAEAPKIAVSVMIENGEGG SSVAAPVAKQVMDAWLLGEDGQLKPEYRPAVPTTEEASATR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site