Pseudomonas sp. ML96, IP89_RS05640
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ML96 ML96_Contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCATGGCCGGTGCCGAGGATGACCAGTACCTGCTGCTCAAACCGCCGTATCGCACCGGACCGGGGCGCATGGTCGACATTTCCGAGCTGCGCCTGCTGC TGGGCATGAGCGAGGTCGACTACCGGCGCCTGGCGCCTTTCGTCAGCGCGCTGCCGAAGGATGTGGAGCTCAATGTGAACACCGCCAGCGCCCAGGTGCT GGCCTGCCTGGCCGACGGCATTCCCGATGCGGCGCTGAAGGCGGTTGTCGAGGGACGCGGTCGCACCGGCTATCGCGACCTCGGCGCCTTCACCCAGCAG CTCAGCGCCTATGCGGTGAGTGCCCAGGGGCTGAGCACCACCAGCCAGTATTTCCGTGTCACCACTGAAGTGCTGCTGGGCGACCGGCGTCAGGTGCTGG TCAGTTATCTGCAACGTGGTAATGATGGGCGCGTCCGTCTGATGGCGCGCGATCTGGGGCAGGAGGGCCTGGCGCCCCCGCCCGTCGAGGAGTCCAAGCA
|
|
| DNA Sequence for Gene |
>IP89_RS05640
ATGAGTCTGCCCACGCTGTTTCTTCCGCCGCAGGCCTGCAACCAGGTGGCCGCCGAGCTGCCGGTCTGGCAGGTCGAGGGCGATATCTGCAGCCAGCTCC CGTTTGCCGAGGCGCTGCCGGCGGCGCAGGCCTGGCGCCTGGTGCTGCCGGTCGAGGCGGTGACCGCCTGCCTGGTGCAGCTGCCGACCACCAAGGCGCG CTGGCTGCAGAAGGCGCTGCCGTTCGCCGTGGAGGAACTGCTGGCCGAAGACGTCGAGCAGTTCCACCTGAGCGTCGGCGGGCAACTGGCCGACGGTCGC CACCGCGTCTATGCGGTGCGTCGCAGCTGGCTGGCCAGGTGGCTGGCGCTGTGCGAGAGCAATCCACCACAGCGCATCGAGGTCGATGCCGACCTGCTGA GCGAGGAGGGCAGCCAGCTGTTCTGCCTGGGCGATCGCTGGTTGCTCGGTGGTAGTGGCGAGGCGCGCTTGGCCCTGCGTGGCGAGGACTGGCCGCAGCT GATCGAGCTGTGCCCGCTGCCACGCGTGGCCTATGTCGCGGCCGGCCAGGCCGCACCGGAAGGTGTCGAGCTTATCCATGAGCTTGCTTCGCCGCTGGCC TGGCTGGCGCGGCAGCGCGCCGAATGCAACCTGGCCCAGGGGCCGTTTGCCCGGCGCGAGTCGTCCGGGCAGTGGCAGCGCTGGCGCCCGCTGGCGGCGC TGGTCGGCCTCTGGTTGGTGCTGCAGTGGGGCTTCAACCTGGCCCAGGGCTGGCACCTGCAGCGTGAGGGCGAGCTCTACGCGCAGGCCAATGCCAGCCT GTACCGCGAGCTGTTCCCCGAGGACAACAAACTGATCAATCTGCGGGCGCAGTTCGACCAGCACCTGGCCGAAGCCGAGGGTGGCGGCCAGCAGCAGTTG CTGCAGCTGCTCGACCAGGCGGCCGCGGCGATTGGCGAGGAGGGCGCGCGGGTGCAGGTGCAGCAGTTGGACTTCAATGCCCAGCGTGGCGACCTCGCGC TCAACCTGCAGGCCAGCGACTTCGCGGCGCTGGAGAGTTTGCGTACGCGTCTGCAGGAGGCCGGACTGGCGGTGGACATGGGTTCGGCGAGCCGGGAAGA CAGTGGCGTCAGCGCACGCCTGGTGATCGGAGGTAACGGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTACGCTGGCTGCGCAACTGCGCGGGCATATCGCCAACAACCCACTGGCTGCCCGCTGGCATGGCCTGCCGCCGCGCGACCGCCTGGCCCTGGGGCTGCT CGGTGGCTTCCTGCTGCTGGTGCTGCTGTACCTGCTGCTGTGGCGGCCGGTCAGCCAGAACCTCGATCAGGCGCACAGCTACCTGCAACAGCAGCGCGCA CTGCATGCCTACCTGCAGGAACATGCACCGCAGGTACGGGCGCAGCAGGGCAAGCCGCAGGTGAGCATCGACCCGAAGGCGATGCAGGGCCTGGTGACCG CCAGCGCGGCGAGCCAGGGACTGAATATCGAACGTCTGGATAACCAGGGCGATGGTGGCCTGCAGGTGAGCCTGCAGCCGACCGACTTCGCCCGCCTGCT GCGCTGGCTGATCAGCCTGGAAGAGCAGGGTGTGCGGGTCGAGGAAGCGGGGCTCGAGCGTGCGGAGAAAGGTCTGGTAACTACCCGTCTATTGTTGCGC
|
|
| Amino Acid Sequence |
>general secretion pathway protein GspL
MSLPTLFLPPQACNQVAAELPVWQVEGDICSQLPFAEALPAAQAWRLVLPVEAVTACLVQLPTTKARWLQKALPFAVEELLAEDVEQFHLSVGGQLADGR HRVYAVRRSWLARWLALCESNPPQRIEVDADLLSEEGSQLFCLGDRWLLGGSGEARLALRGEDWPQLIELCPLPRVAYVAAGQAAPEGVELIHELASPLA WLARQRAECNLAQGPFARRESSGQWQRWRPLAALVGLWLVLQWGFNLAQGWHLQREGELYAQANASLYRELFPEDNKLINLRAQFDQHLAEAEGGGQQQL LQLLDQAAAAIGEEGARVQVQQLDFNAQRGDLALNLQASDFAALESLRTRLQEAGLAVDMGSASREDSGVSARLVIGGNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|