Pseudomonas sp. ML96, IP89_RS04330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ML96 ML96_Contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCAGGTCGACACGCCAGTCGAAGCTGCCGGCTTCGATCTCGGCCTGGATTTCCTTCAGTCCGGCCGCGATGGCATCGCGCTCGTCCGCGGTCAGTACGC CGACCTTGGCCAGCATGGTGGCGTGGGCGATGGAACCCATGATGTCGTGGCGATACAGGCGCTTGTCGAAGTCGACGGAGGCGGTGAAGCGGGCGACAAA GGCGTCGACTGGCTCGCTGAAGCGGCCGCCCCAGGACTGGTTGGTTTTTTCGCTGCTCATGGCTGGACTCGTGGCAGGGCAGGCGCGGCGGGCACCTGCG GAACGGACAAAGTGTGCCGATAATAACAGCCTTGCCGGGAAAACCGAGGCCGCGCCGATCTGCCGGGTGCGTCACAGTTTTCACCGGCCGGTGGCATTTG GGCGCCCGTTTTGGCCCGGCCGGAGCGCTCTGGCTTGCCGCCCGGGGGCGCACACAAGGAAACTGCGCGGATGAAAATCCACTGGTTCAACAAGGGCCGC
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| DNA Sequence for Gene |
>IP89_RS04330
GTGCTGGCCCAGGGCGACGATTTCTTCATTCCGGAACTGTGCGAGCCCGAGGCTCTGCTCAGCCTGGTGCTGCTGGCCGAGCTGCTGGTGCTGGTGCTGG TATTGGCCGAGCCGATGCTGCCGGGCTTCAACTGGGTGCGCCTGGCGCTGACCTCGTTGTTCGTGCAGTGGATCGTGCTGCTCTCGGCGGCGCTGCTGTG CCGCTTGCGCCCGCTGCTGGCGCGGCTACGCGCGGCCCTGGCCGGTACCCTGTGCTGCGCCCTGGTGATCGGCCTGACCTTGGCCTGCACGGCGGTGGCC GACTATTACGAGCTGGGCGGGCCGCTGCCGCGCAGTGGCGAGGTCAACCTGTACCTGCGCCATGCGCTGATCAGCCTGATCATGTCGGCGCTGCTGCTGC GCTATTTCTATCTGCAGAGCCAGTGGCGCCGGCAGCAGCAGGCCGAGCTCAAGGCGCGCATCGAGTCGCTGCAGGCGCGCATCCGCCCGCATTTCCTGTT CAACAGCCTGAACAGCATCGCCAGCCTGGTGGCGATCGACCCGTACAAGGCCGAGCAGGCGGTGCTCGATCTCTCCGACCTGTTCCGAGCCAGCCTGGCC AAGCCCGGCACCCTGGTGCCCTGGGCCGATGAACTGGAACTGGCCAAGCGATATCTGTCGATCGAGCACTACCGGCTCGGCGAACGTCTACAGTTGGATT GGCAGGTGGAAAACGTGCCGACGGATTTGCCGATCCCTCAGCTGACCTTGCAGCCGCTGCTGGAGAATGCCCTGATCTATGGCATCCAGCCGCGCATCGA GGGCGGCCTGGTGCGAATCGAGGCGGATTACCAGGACGGGGTGTTCCAGCTCTGCGTGAGCAATCCCTATCAGGAAAGCGCCGAACAGCAACCGTCGCGC GGTACCCACCAGGCCCTGGTGAATATCGACGCGCGTCTGGCGGCACTTTTCGGCCCCGGCGCGAGTCTCAGCGTGGACCGCCGTGACGGACGCCACTTCA CCTGTCTACGCTATCCTTGTTCGAGACTCATGCAGGAAGCCCGAGCAATATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGTGCTGATCGTCGATGACGAACCCCTTGCCCGCGAGCGCCTGACCCGTATGGTCGGCGAACTCGAGGGTTATCGTGTCCTCGAGCCCTCGGCCAGCAA CGGCGAAGAGGCGCTAGCGCTGATCGACAGCCTGCGCCCCGACGTGGTCCTGCTGGATATCCGCATGCCTGGCCTCGATGGCCTGCAGGTCGCCGCCAAG TTGTGCGAGCGCGAGGCGCCGCCGGCGGTGATCTTCTGCACCGCGCATGACGAGTTCGCCCTGGAGGCCTTCGACGTCAGCGCCGTCGGCTACCTGGTCA AACCGGTGCGCCCCGAGGCGCTGGCCGCGGCGTTGAAGAAGGCCGAACGGCCGAACCGCGTACAGCTTGCCGCGCTCACTCGCCCAGCCACGCCGGGCAA TGGTGCCGGCCCGCGCAGCCATATCAGCGCGCGCACCCGCAAGGGCATCGAGCTGATTCCGCTGGAGCAGGTGATCTTCTTCATCGCCGACCACAAGTAC
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| Amino Acid Sequence |
>alginate O-acetyltransferase
MLAQGDDFFIPELCEPEALLSLVLLAELLVLVLVLAEPMLPGFNWVRLALTSLFVQWIVLLSAALLCRLRPLLARLRAALAGTLCCALVIGLTLACTAVA DYYELGGPLPRSGEVNLYLRHALISLIMSALLLRYFYLQSQWRRQQQAELKARIESLQARIRPHFLFNSLNSIASLVAIDPYKAEQAVLDLSDLFRASLA KPGTLVPWADELELAKRYLSIEHYRLGERLQLDWQVENVPTDLPIPQLTLQPLLENALIYGIQPRIEGGLVRIEADYQDGVFQLCVSNPYQESAEQQPSR GTHQALVNIDARLAALFGPGASLSVDRRDGRHFTCLRYPCSRLMQEARAI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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