Pseudomonas sp. ML96, IP89_RS04085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. ML96 ML96_Contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCGTGATTTCGCCGATCTCAAGGGCAAGACGGTCGCAGTCGAGGCCGGTACTACCTCCGAGCGCTTGTTGCGGACCCTTATTAGCGAAAGGGATCTGG ATATCAGCATCCTGTTGACGAAGGACACCATCTCCAACTTCAACATGGTGGAGACAGGTCGGGCGATCGCCTCGATGGGCGACGACATCATCTTCTTCGG CAACATTGCTATCGCCAGAAAACCCGAGCAGTGGGCGGTAGTAGGTACCTCGCAGTCACACGAGGCCTACGGATGCATGCTGCGCAAGGATGATCCGGCC TTTAAGAAGCTGGCAGATTCGGTGATTAGCGAGATGCAGACGTCCGGGGAAATGCTCGAGCTGTACAACAAGTACTTCAACACGCGCATTGACGTTAACG GTGGCTTGGAGATTCAGGCTCCGCTGTCACGTGAAAACGCCCATCTCTACCAGAACCCCAACGACCGCCCGTTCCAATAATCCATTCAGGTACGCCTCTT
|
|
| DNA Sequence for Gene |
>IP89_RS04085
ATGAACTACAGCTGGGACTGGAGCATATTCTTCCAACCCTCCGTCACGGGCGAAGGCCTATATGGCGTGCTGCTGGCTGAAGGCGTGCTGTGGACGCTGG CGTTGTCATTGCTTTCCTGGGGCCTCGCGTTGGTGCTCGGAACCTTCACGGGCATCGCACGCAACTCGAGTAGCACCTCGCTGCGCTGGGCGTCGGCCGT CTATGTCCACTGCTTTCGTAACACGCCGCTCTTGGTGCAGCTGTTCCTTTGGTATTTCGTGATACCGGAGCTGTTGCCGGTTGAGTGGGGGAACGCGATC AAGCATATGGACCCCACCCTGAACCAGTTCTTGAGCGTCATCGTGTGCTTGACGCTGTACACCACGGCAGGGGTGGCGGAACAAGTGCGCGCGGGGCTCC GGTCAGTTCCTCCCGAGCAGGCCAGGGCCGCCAGGGCGATGGGCTTGAGTACGTGGCAGGTATACCGGCTAGTCCTGCTTCCGCAGGCGTTCCGCGTGGT ACTGCCGCCGCTGACCTCCGACTTCATGAATGTGTTCAAGAACTCAGCTGCGGCCTTGACCATAGGCTTGATGGAGCTCACCGGGCAAAGCCGGCACCTC AGCGAGTTCACCGGCCAGCCGTTTGAATCGTTCATCGCCGCGACCCTGATCTACATGGCGATCACCTATCTGGTAGTGATCGTGATGCGTCGCATGGAGT CCAGCATGGCAGTTCCGGGCTTCATCACTGCGGGCTTTCCACGATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACTACGACTTCGACTGGTCCGGGATCATTCCGGCGCTGCCCTACCTGGCTGAAGGGATGAAAACCACCTTGCTGTTGGTCGTGGTGGCCTTGGTACTGGG TTTCGCCTTGGGCTGCATGCTGGCGGTTGTCCGCCTCTATGGTCCGAAGTCTCTCGCCAAGCTGGCCGCCGAGTACGTGAATTTCTTCCGCGCCATTCCG CTGATTCTGACGATTTTCTGGATGTTCCTGCTGATGCCCTTCGTGTTGAGAAAGCTCACGGGCGACCCCTACCTGACGGTAGGCCCCCTGTACGCAGCCA TCATTGCCCTAGTCCTCGCGGAGTCGGCCTACTTCTGCGAAATAGTTCGCGCGGGTATTAGCAGCGTGAAAAGCGGCCAGATGGCAGCGGGCAAAGCCTT GGGGATGAGCACGCTGCAGTGTTTGCGCTGGGTCGTGCTACCGCAGGCGCTGAGGAACATGAGCCCGTCCTTGGTCAACCAAGTTGTTGGTCTGCTCAAG
|
|
| Amino Acid Sequence |
>glutamate ABC transporter permease
MNYSWDWSIFFQPSVTGEGLYGVLLAEGVLWTLALSLLSWGLALVLGTFTGIARNSSSTSLRWASAVYVHCFRNTPLLVQLFLWYFVIPELLPVEWGNAI KHMDPTLNQFLSVIVCLTLYTTAGVAEQVRAGLRSVPPEQARAARAMGLSTWQVYRLVLLPQAFRVVLPPLTSDFMNVFKNSAAALTIGLMELTGQSRHL SEFTGQPFESFIAATLIYMAITYLVVIVMRRMESSMAVPGFITAGFPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|