Pseudomonas sp. ML96, IP89_RS03945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGGAAGCGATTTCCGAGGGCGTGGTGGACGTCGAGACCCAGGCCAAGGCCGTGTCCAAGCGCGTGCTGATCTGCGACGACTCATCGGTGGCGCGCAAGC AGGTTTCGCGCTGCCTGGAGAGTGTCGGCGTGGAGGTCGTGGCGCTCAACGATGGGCGCGAAGCCTATGACTATCTGCGCAAGATGGTGGAAGAGGGCAA GGACCCGGCGAAAGAATTCCTCATGCTGATCTCCGACATCGAGATGCCGGAGATGGATGGCTACACCCTGACGGCGGAGATTCGTTCCGATCCGAGGATG CAGACCCTGCATGTGATTCTGCATACTTCACTCTCCGGAGTGTTCAACCAGGCGATGGTGAAGAAGGTCGGGGCCGATGACTTCCTGGCGAAGTTCCGGC CGGATGATCTGGCCTCGCGCGTGGTGGAACGCATCCGTGTAGCTGATGGGGGCTGAGGGCTCGGCCCTCGGTTAGGACTATGTATGGTGAGGCGGCATTA
DNA Sequence for Gene
>IP89_RS03945
GTGTCTTCAGGGAATTTGGATTTCGAGCAGTTCCGGACCTTTCTGGAAAAGGCCTGCGGCATTCTGCTGGGGAGCAATAAGCAATACCTGGTGTCCAGCC GCCTGAACAAGTTGATGGAACAGCAGGGGATCAAGACCCTCGGCGAACTGGTGCAGAAGATGCAAGCCCAGCCTCGTGGAGGGTTGCGCGAGCAGGTGGT GGACGCGATGACCACCAACGAAACCCTGTGGTTCCGCGATACCTATCCCTTCGAAGTGATGAAGAACCGGGTGCTGCCCGAGCTGATCAAGGCCAACCCC AGTCAGCGTCTGCGCATCTGGTCGGCCGCCTGTTCCTCAGGGCAGGAGCCTTACTCGCTGTCCATGACCATCGACGAGTTCGAGAAGACCAACCTGGGGC AGCTCAAGGCTGGCGTGCAGATAGTGGCGACGGATCTGTCGCCATCGATGCTGACCAACTGCAAGTCCGGCGAGTACGACAGCCTGGCCATGGGTCGCGG TCTGTCACAGGATCGCCTGCAGCGCTACTTCGATCCCAAGGGACCGGGGCGTTGGGCAGTCAAGACGCCGATCAGGAGTCGAATCGAGTTCCGTCCGCTG AATCTGCTGGAGAGCTACGCGGCTCTCGGTAAATTCGATGTGGTGTTCTGCCGCAACGTGCTGATCTATTTCTCGGCCGAGGTGAAGAAGGACATCCTCA CCCGCATCCATGCCACGCTCAAGCCGGGTGGCTATCTCTTCCTCGGGGCTTCCGAGGCGCTCAACGGCCTGCCAGACCTCTATCAGATGGTTCAGTGCAG TCCGGGGATCATCTACAAGGTGAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGGAAGTGTGTGCAGACGGGAGGCCTAGGCCTCCCGTTTTCATTTCCGGGGCGGCAACGCGGCATTGCCGGCTTTGCCGCTTAGCCTGTTTCAAGCGG AAAAGCTTTGCCGCTTGCCGCTTGTCAGGTTGCTTAAGACTTTGTAAGTGAATGAAAAATAAGAAAAAATAAAATTGGCACAGCCTTTGCTGAATGTCTG GCAACACGCCCAACCGGCAAAGGTTCCAGATCATGAGCATCAGCTTCGAAAGCGCACTTGGCATCCACGAAACAGCCCTCGGCTTCCGTGCCCGCCGTGC CGAGGTTCTGTCCAACAACATCGCCAACGCCGACACCCCGAACTACAAGGCGCGTGATCTGGATTTCTCCGCCGTCCTGGCCGAGCAGAGCGAGAAGCAG AGTGGCAAACAGTTCGGCCTGAACCGTACCGACACCCGTCATATTGCCGCTGACGGCATCGAGTTGGCCGACCCGGCACTGCGCTACCGCACCCCGTTCC
Amino Acid Sequence
>chemotaxis protein
MSSGNLDFEQFRTFLEKACGILLGSNKQYLVSSRLNKLMEQQGIKTLGELVQKMQAQPRGGLREQVVDAMTTNETLWFRDTYPFEVMKNRVLPELIKANP SQRLRIWSAACSSGQEPYSLSMTIDEFEKTNLGQLKAGVQIVATDLSPSMLTNCKSGEYDSLAMGRGLSQDRLQRYFDPKGPGRWAVKTPIRSRIEFRPL NLLESYAALGKFDVVFCRNVLIYFSAEVKKDILTRIHATLKPGGYLFLGASEALNGLPDLYQMVQCSPGIIYKVK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site