Pseudomonas sp. ML96, IP89_RS02150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. ML96 ML96_Contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGTGCTCGGCATCCTCTACGAGAGCTATATCCACCCGCTGACCATTCTCTCCACATTGCCCTCGGCGGGTGTCGGCGCGCTGGCTGCGATCCTGCTCA CCGGTGGCGAGTTCAGCATGATCTCGCTGCTCGGCCTGTTCCTGCTGATCGGCGTGGTGAAGAAGAACGCCATTCTGATGATCGACCTGGCCCTGGAGCT GGAGCGCAACGAGCACCTGAGCCCGCAGGAATCGATCCGCCGCGCCTGCCTGCTGCGCTTCCGCCCGATCATGATGACCACCCTGGCCGCCATGCTCGGC GCACTGCCGCTGTTGCTCGGCCAGGCCGAAGGCGCCGAGATGCGCCAGCCGCTGGGCCTGGCCATCGTCGGCGGCCTGGTGCTCAGCCAGTTGCTCACCC TCTACACCACTCCGGTGGTCTACCTGTATCTCGACCGCCTGCGCCATCGGGTCAACCGCTGGCGCGGCGTACGCAGTGACGCTGCTCTGGAAACGCCGCT
DNA Sequence for Gene
>IP89_RS02150
ATGAAGCCTGTACTGCCCCGTTTTTCGCCTCTGCTGGTTGCCTTGCTGCTGGCCGGCTGCGCCGTCGGCCCGGACTATCTGCGCCCGGATAGCGCGCCGT CGGCCGAGTTCAAGCAGGCCGCCGGCTGGAAGTCCGCCGCACCGGCCGATACCGCGCTGCGGGGCGACTGGTGGAAGCTCTACGGCGACGCCGAGCTGGA CGCGCTGGTCGAGCGCCTGGACGCCAACAACCAGAGCCTGGCCTCGTCTGCGGCCCAGTACCGTCAGGCCCAGGCCTTGGTGCGTGGCGCGCGGGCCGGC TTCTTCCCGACCATTGGCCTCAACACCGGCGTGACCCGCGCCGGCCAGGGCGGTGGTGACAGCACCATCGGTACCACCGGCGGCATCAGCGTCAGCGGTG GCGGCCAGTCGCAGGTGTCCAAGAGCTACGAGGCAAGCCTTGGCGTGAGCTGGGAGCTGGACCTGTGGGGCAAGCTGCGCCGCCAGCTGGAGTCGGAAAA CGCGGGACTCGATGCCAGCAGCGCCGACCTGGCCGGCGTGCGCCTGAGCCAGCAGTCCGAGCTGGTGCAGAACTACCTGCAACTGCGCGTGCTGGATCAG CAGAAGCGCCTGCTCGACGAGACGGTGGCTGCCTACAAGCAAGCCTTCCGCATCGCCGAGAACCAGTACAAGGCCGGCATCGTGCCGAAATCCGACGTGA CCCAGGCGCTGACCCAGCTCAAGGGCACCGAGGCCGAGGCGGTGGATCTGGAATACCAGCGCGCCCAGTTGGAGCACGCGATCGCCGTACTGGTCGGCGT GGCGCCTTCCGAATTCGAACTGGCGGTGCGCGATGACGTGCCGGCGCTGCCCAGCGTGCCGGTCAGCCTGCCATCAACCCTGCTCGAGCGCCGCCCCGAC GTGGCCGCCGCCGAACGCCGGGTGATGGCCGCCAACGCCGAGATCGGCGTGGCCGAGGCCGCCTACTATCCGGAACTGAGCCTGTCCGCTTCGGGCGGCT ATCGCAGCGGTGGCCTGGACAACTGGATCAGCTCGCCCAACCGCTTCTGGTCCATCGGTCCGGCCTTCGCCCTCAACCTGTTCGATGGTGGCCTGATCCG CTCCCGCGTCGAGCAGGCCGAGGCGAGCTACGACCAGACCGTGGCCGACTACCGGCAAACGGTGCTGCGCAGCTTCCGCGAAGTGGAGGATTATCTGGTG CAGCTGGCCGTGCTGGAGCGCGAGGCGGTGGTGCAGCAGGAGGCGCTGGACGCCGCCCGCGAATCGCTGCGGCTGATGCTCAACCAGTACCGCGCCGGTA CCGTGGAGTTCACTGATGTGGTCAGCGTGCAGACCACCGCGCTGTCCAACGAACGCACCCGTCTGACCCTGCAGGGCAGCCGCCTGACCGCCAGCGTGCA GCTGGTCGCGGCCCTGGGCGGCGGTTGGCAGGGACTGCCAGTCGAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCTGCGATCTCGCTGCCGTCCAATCGACGCGCAGCAGATCCCAGGTAGGCTCAAGGCTTGATGGTCGCCTCGATGCGCACGATTTTCGGTTCGCCGTCG ATCAGGCGCAGGCTGGCGGTTTCCTGCATGCCAGTGCTCATCTCGTGGCCCTGCATGCTCAGGGTTTCCTTGGTGGTGTCCTTGACCGTGGCGCTCTGGC CGTCGGCGGCGATCTCGATCGACTCGATGGCCACTTCCATGCGGTAGCTTTCCAGGCCGCCCCAGCCTTGCTGCAGCAGCTGGCGGTATTTGCTGGCATC GAGTTCGATGCTGCCGTTGGGCGCGCTGATATGGATGCGCACGTCGTCGCTCATGTGCGACAGGGTGGCGTCGATGTCGCGTTTCGAGGCGTCGGCCGCC ACCTGGTCGTACAGGCTGCGGATACTGGCTTCGGTCAGCGCCGAATCGGCGTGGGCGAGTGGGGCGAACAGGCAGAGCAGGGACAGCGCGAGCTTTTTCA
Amino Acid Sequence
>RND transporter
MKPVLPRFSPLLVALLLAGCAVGPDYLRPDSAPSAEFKQAAGWKSAAPADTALRGDWWKLYGDAELDALVERLDANNQSLASSAAQYRQAQALVRGARAG FFPTIGLNTGVTRAGQGGGDSTIGTTGGISVSGGGQSQVSKSYEASLGVSWELDLWGKLRRQLESENAGLDASSADLAGVRLSQQSELVQNYLQLRVLDQ QKRLLDETVAAYKQAFRIAENQYKAGIVPKSDVTQALTQLKGTEAEAVDLEYQRAQLEHAIAVLVGVAPSEFELAVRDDVPALPSVPVSLPSTLLERRPD VAAAERRVMAANAEIGVAEAAYYPELSLSASGGYRSGGLDNWISSPNRFWSIGPAFALNLFDGGLIRSRVEQAEASYDQTVADYRQTVLRSFREVEDYLV QLAVLEREAVVQQEALDAARESLRLMLNQYRAGTVEFTDVVSVQTTALSNERTRLTLQGSRLTASVQLVAALGGGWQGLPVEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site