Strain | Pseudomonas sp. KG01 sole5_rep_c161, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGGACACCGCTGCCGATCGCATTCGCGGCCTGGACCTGGGCGCTGACGATTACGTTACCAAGCCGTTCGAGCCCCGCGAACTGGTGGCGCGCATCAACA GCGTGCTGCGCCGCCAGGGCCGTAACACCGGACCTTCAACACTCAGCAACGGCGCACGCGCCTATCACTTTGCCGGCTGGCATTTCAGCGTCAGCAACGC AACGCTGTGCCGCGACGGCGCCCCCGCGATTCAGCTGAGCACCGCAGAAAGCCGACTGCTGCAAGTCTTCCTCAACCACCCCAACACCCTGCTACACCGC GAGCGGCTGATCGACTTGACCGCCGCCGCCGACAGCGACGTGAGTGACCGTGCCATCGACCGCCAGGTCAGCCGTCTGCGGCGCAAACTGGCCCAGGGCG ATGCCGCACCGGACCTGCTGCGCACCATCTGGGGCGGCGGTTACCTGCTGGCGGCCGAGGTCAGCGAATGCACGCCCTGAGCCGACTGTGGCCCAGCGCG
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DNA Sequence for Gene |
>ACR52_RS27610
ATGGCGCACCAGTTGGGACTGTTGTTGTTACTCGCACTGCTTGCCTCGAACGCCATTGCGATGTTGTTCCTGCAACGCACCGGCAACCTGATCCACCCGT TGTCGCGCAGTTTCAGCCTGGAGCGCTTGAGCACCGCGCATCACGCCGCCGTCGAGTTGACCGCCACTGAAACCGCGCATCTGTTAAGCGCCATGAGCAC CGACGGCGCGCGCTTCTGGATTGCCTCGACGCCGGACGTCGCGCCGTTTGAACTGCGCCAGGAGGAACATCGGCTGGCCAGCGAGTTGCGCACACAACTG CAATTGAACAACGACGTCGCCATCGGCATGCAGTTGGAGCGCATCAGTGGTGCCGACGCGCGCACCCATGTGTTCAGCCCCGCCGGCTGGGCGCCGTTGC GACTGCGCAGCAGTGTCGCGCTGCCGAGCGGCGAGTACTTGAACGCCCTGCAACACCCCGCCGGCGCCTATGAATGGGGCCGCGTCCTGGCCTACAGCCT GCCGGTGACGACGCTGCCGGTGCTGCTGATCGTGATGTTTTTCATCGCGCGGGTGGTGCGCCCGGTGAAAACCCTGGCCCAGGCCACCGAACGGGTCAGC CGCGGCGAATGGATTGCGCCGCTGCCGGAACAAGGCCCGAGGGAAGCGCGCGAGTTGACCATGGCCTTCAACACCATGCAGGCCAGCCTGGCGCGGCATG TGGAAGGCCGCACGCGGATGCTTGCGGCGGTCAGCCACGACTTAAACACACCGATCACCGAGCTGCGCCTGCAGGTCGAATTGCTGGAGCCCGGCGCGGC CCGCGATGACATGCTTGAAAGCCTCGAGGAGTTGAGCGCCATGGTGCGCGAAACCCTGAATTTCGTGCGCGATGATGCGGTGCAGGAAAGCACCGCCACG CTGTCGCTCACGGCCCTGCTGGAGGATCTGGCCAAGCGTTACCAGCGCCTGCAGCAGCCCGTCACCTGGCACGCCGCATCGCCGCTGATGCTGACGTGTC GCCCGCTGGCGCTCAAGCGTGCCCTCACCAACCTGATCGACAACGCCCTGCACCATGCCGGCGACGCCAGCATCCGCCTGACGCGCCAGGATGACGGCCT GCTGTGCATCGAGATTCTCGACCACGGCCAGGGCTTGCCCGAAGAGTGGCTCACGAAAGTGTTCGAGCCCTTTGTACAACGCGGTGTCAGCGACGGCGGG CTGGGGCTGGGCCTGGCGATTGCACGGTCGTGCATCCAGGCCCACGGCGGCGAGCTGGTGCTGGAAAATCGCCCTCCGGCCGGCCTCTGCGCGGTGGTGC GACTGCCTGCAGCGCTTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGTTGAGCGTGGCGCCCATCCACAGCGTGCGGCCGTAATTCACTGTGCCGTAGGTTTCGTCGTCCAGGCGCTTGTCGGTGAGGTTGTTGAGGGAGGCAT TGAGCGTCAGCGACTCGGTCAGGTCGTAGGAGCCGCCCAGGTCTGCGGTGGTATAGCCCGGCGCCGGTTCGTCAGTGGTGATGGTGTTGCCGGTTTCTTC ACCGTAGTAGCTCAACGAAGCCCAGGCCTGGGCGCGGTCGTTGATGCTCCACTCAGTGCGCACATTGGCCTTTTGCTTGGGCGTGAGGGCCAGGGGCGCG CCGGCGTTGGCGCCACTTTTTTGCTCGGAATCGGTGTAGGTGTAGTTGGCCTTGAGCAGCACGCTGGGGTTGATGTCCCATTGGCCGTTGAGCTCCACGC CCTGGATGATCGCCTTGTCGACGTTGACCCGCTCCATGATGGTGTAGCCGTTCCAGCGCCGGTCGGTGGTGACGGTGGAGAGCTTGTCCTGAAAGTCGTT
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Amino Acid Sequence |
>ATPase
MAHQLGLLLLLALLASNAIAMLFLQRTGNLIHPLSRSFSLERLSTAHHAAVELTATETAHLLSAMSTDGARFWIASTPDVAPFELRQEEHRLASELRTQL QLNNDVAIGMQLERISGADARTHVFSPAGWAPLRLRSSVALPSGEYLNALQHPAGAYEWGRVLAYSLPVTTLPVLLIVMFFIARVVRPVKTLAQATERVS RGEWIAPLPEQGPREARELTMAFNTMQASLARHVEGRTRMLAAVSHDLNTPITELRLQVELLEPGAARDDMLESLEELSAMVRETLNFVRDDAVQESTAT LSLTALLEDLAKRYQRLQQPVTWHAASPLMLTCRPLALKRALTNLIDNALHHAGDASIRLTRQDDGLLCIEILDHGQGLPEEWLTKVFEPFVQRGVSDGG LGLGLAIARSCIQAHGGELVLENRPPAGLCAVVRLPAAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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