Pseudomonas sp. KG01, ACR52_RS13235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCAACGGACTGGAAGTCGGCCTGCCACCGTTGCGTGAGCGCAGTGATAAGTCTCAACTGCTGGATTTTCTACTGGCCGAAGAGGCTGGCGGGCAGAGCG TATGGCTCGACCCGGCGGCGCGTTCGGCGTTGTTGGCCTTTGCCTGGCCCGGTAATGTCCGGCAGTTGCGCACGGTGTTGCGCACACTGGCGGCGCTGTG TGATGGCGGGCGTATCGGCGTTGAGGACTTGCCCGTGCTGATTCGCCAGGCGCAACCGCTGCCGGTCACCGAGGCGAAGCCTGTGGAGTCCCCGCTCGAA GATGCCGAGCGACTCGCCTTGCTCACGGCACTGGAGCAACAACGCTGGCACATGACCCACACGGCGGAGCAGTTGGACGTCAGCCGCAACACACTGTATA GAAAGCTGCGCCGGCACGGCATTGCACGGCAGGCGATCAGCTAAAGAGTGCGATTTTTGCCCCCCTGCGCTAACCTGCCTCGATGTTTACGAGGTCGACT
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| DNA Sequence for Gene |
>ACR52_RS13235
ATGCACATTCATATTCTTGGTATCTGCGGCACTTTCATGGGTTCGATGGCGGTTCTGGCCAAAGAGCTGGGCCATCATGTCACCGGCTCCGACGCCAACG TCTACCCGCCCATGAGCACACAGCTGCAGGCCCAGGGCATTGAGCTGACCCAAGGCTACGACCCGTCGCAATTCGACCCGGTTCCGGACCTAGTGGTGAT CGGCAATGCCATGTCCCGTGGCAACCCGGCAGTCGAGTACGTACTCAATAAAGGTTTGCCTTATGTGTCCGGCCCGCAGTGGCTGTCCGACCATGTGCTG CAAGGTCGCTGGGTATTGGCGGTCGCCGGCACCCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCAGGCATGAGCCCGGGCT TCCTGATCGGCGGCGTGCCGCAGAATTTTTCGGTGTCGGCGCGCCTGGGCGATACGCCGTTCTTTGTGATCGAAGCCGACGAGTACGACAGCGCCTTCTT CGACAAGCGTTCCAAGTTCGTTCACTACCGCCCGCGCACGGCGATCCTCAACAACCTTGAGTTCGATCATGCCGACATCTTCCCCGATTTGCCGGCCATC GAGCGCCAGTTCCATCACTTGGTGCGCACCATTCCGAGCGAAGGCCTGGTGATCTACCCGACCACCGAGCCCGCCCTGCAGCGCGTGATCGACATGGGCT GCTGGACGCCGGTGCAAACCACCGGCGCGGGCGGGCAGTGGCAGGTCAAGTTGCTCAGCGAAGACGGCTCCAAATTTGAAGTGCTGTTTGAAGGCGTGGC CCAAGGCGTTGTCGAATGGGACATGACCGGCCAGCACAACGTTGCGAATGCCCTGGTGACCCTGGCGGCCGCACGGCATGTGGGTGTTGTACCGTCCATG GGGATCGATGCGTTAAGTGCGTTCAAAAGCGTGAAGCGCCGCATGGAAAAGGTCGCCGACGTGAATGGGATTACCATCTACGACGACTTTGCCCACCACC CAACGGCGATTGCTACCACGCTCGATGGCTTGCGCAAGCGAGTCGGTGATGCGCCGATCATTGCGATTGTCGAACCGCGTTCCAACTCCATGAAGCTCGG CGCGCACCGCGATGGCCTGCCGGAAAGCGTCAACGACGCCGACCAGGTGGTCTGGTACGCCCCGGCCAACCTTGGGTGGGACCTGCCAGGGGTCGCTGCG TTGTGCACGGTGCCGTCGAAGGTCTGCGATTCCATCGACGGCATCATCGAATTCGTCAAGCATCAGGCCAAGCCGGGCACCCACGTGGTGGTCATGAGCA ACGGCGGCTTCGGCGGCCTGCATGGCAAGTTGGCCGAGGCGCTGAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCCCGGAACGCGTCACCCTGGCGATGACCGGCGCGTCCGGCGCGCCCTATGGCCTGCGCTTGCTCGATTGTCTGGTGCGCGAAGACCGCGAGGTGCA CTTCCTGATCTCCAAGGCTGCGCAATTGGTGATGGCCACCGAGACTGACGTCGCGCTGCCCCCCAAGGTGCAGATGATGCAAGCCTTCCTCACCGAATAC ACCGGTGCGGCGGCGGGGCAGATCAAGGTCTATGGCAAGGAAGACTGGATGTCGCCGGTGGCCTCGGGCTCTGGCGCGCCGGCGGCGATGGTGGTGGTGC CGTGTTCCACTGGCACCTTGTCGGCGATTGCCACAGGCGCCTGCAACAACCTGATCGAGCGCGCAGCCGATGTGACGTTGAAGGAGCGTCGCCAGTTGAT TCTGGTGCCGCGTGAAGCGCCGTATTCGAGCATTCACCTGGAGCACATGCTGAAGTTGTCGAACATGGGCGTGACGATATTGCCGGCATCGCCAGGCTTC
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| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHILGICGTFMGSMAVLAKELGHHVTGSDANVYPPMSTQLQAQGIELTQGYDPSQFDPVPDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLSDHVL QGRWVLAVAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFSVSARLGDTPFFVIEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLPAI ERQFHHLVRTIPSEGLVIYPTTEPALQRVIDMGCWTPVQTTGAGGQWQVKLLSEDGSKFEVLFEGVAQGVVEWDMTGQHNVANALVTLAAARHVGVVPSM GIDALSAFKSVKRRMEKVADVNGITIYDDFAHHPTAIATTLDGLRKRVGDAPIIAIVEPRSNSMKLGAHRDGLPESVNDADQVVWYAPANLGWDLPGVAA LCTVPSKVCDSIDGIIEFVKHQAKPGTHVVVMSNGGFGGLHGKLAEALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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