Strain | Pseudomonas sp. KG01 sole5_c8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACAGTGGCGTCGGTGGCCAGTACCAGGGTGGTCAGCAGGTCATCGGCGATGCCTTGGGCCAGGCGGGCGATCAGGTCGGCGGTGGCCGGGGCGATCAGT ACCAGGTCGGCCCATTTGGCCAGCTCGATATGGCCCATGGCAGCTTCGGCCGCCGGGTCCAGCAGGTCGAGGTGAACGGGGTGGCCGGACAAGGCTTGCA TGGTCAGCGGGGTGATGAACTCACTGCCGCCACGGGTCATGACCACGCGCACTTCAGCGCCCTGGTCGAGGAGCCTGCGAACCAGTTCTGCGCTCTTGTA GGCGGCAATGCCGCCGCCGACGCCGAGAACGATGCGTTTCCGATACAGACGCTGCATTGGTTTGCCTTTCCAGTTCAGTGATGCCAGTTCAGTGACGCGT GCGATGCCCCCTCCCCAGGTGAAATCGCATGCAAAAAAGAGGGCCTACGATAACACAGCGTCCGCCCGGCAACAGCGGCGCACGTACACACGGAGGTGGG
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DNA Sequence for Gene |
>ACR52_RS10230
ATGAGTATTCGCGATTGGCCGGCGGCAGAGCGGCCGCGAGAGAAGCTTTTGGAGTGGGGGGCGGCGAGTCTGTCGGATGCCGAACTGTTGGCGATTTTCC TGCGTACCGGGGTTTCCGGCAAAAGCGCGGTAGACCTGGCGCGCCACCTGCTGGTGCAATTCGGTGGCCTGCGCCCGCTGCTGGAGGCCAGCCAGGCGCT GTTCAACCAGCAACTGGGGTTGGGGCCAGCGAAGTTTGCGCAGTTGCAGGCGGTACTGGAAATGTCTCGGCGGCATATGGCCGAGCGCCTGCGCAGTAAC TCGGTACTGGAAAGCCCGGTGGCCGTGCGCGATTACCTCAAAGCCCTATTGCGTCATGAGCCTCACGAGACGTTCGGTTGTCTGTTTCTCGATTCAAAGC ATCGAGTGCTGGGGTTCGAGGCGTTGTTCCAGGGCACCATCGACGGCGCTATGGTTTACCCACGGCAAGTGGTCAAGCGCGCACTGGCGTACAACGCCGC GGCGCTGATCCTGTGTCACAACCATCCTTCGGGAAGCGTGGAGCCGAGCGCTGCTGATCGAAAATTGACCAGGTTGCTGCAAAAGGCCCTGGAAGTGGTG GATGTGCGGGTGCTGGATCACATCATCGTGGGGGATGGCGATCCGTTGTCGATGGCCGAATACGGATGGATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAGGAGAGCAGCAGTAAGTTTCAAGCTGCAAGCCTCACGTGGGCTTGCAGCTTGCAGCTTGCAGCTCAGGGCTTGACGCTGACTTTCGAGAAATCCTGCC GACCAAACGGACTTACCTGATACCCCTCGACATTGTTGCGCGTCAGGGCAAACGCCGTCGGGTGTGCCAGCGGCAACCACAGCGCCTGTTGCTGGATCTG CGCCTGGGCCTGTTGATACAGCTTGCTGCGCACCCCTTGTTCGCTGGTGGTCTTGCCGGCGCTGATCAGTTTATCCAGGGCGGGGTCGCAGTAGCGGGCG AAGTTGGTGCCGGACTTCACCGCCGCGCAGGAGAACTGCGGGGTCAGGAAGTTATCCGGGTCGCCGTTGTCGCCGGCCCAGCCCATGAACAGCAGGTCAT GCTCACCGGCCTTGGCGCGCCGAATCAGCTCGCCCCATTCGATCACGCGGATCTCGGCCTGGATGCCGACCTTGGCCAGGTCGGCCTGCAACAGTTGCGC
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Amino Acid Sequence |
>hypothetical protein
MSIRDWPAAERPREKLLEWGAASLSDAELLAIFLRTGVSGKSAVDLARHLLVQFGGLRPLLEASQALFNQQLGLGPAKFAQLQAVLEMSRRHMAERLRSN SVLESPVAVRDYLKALLRHEPHETFGCLFLDSKHRVLGFEALFQGTIDGAMVYPRQVVKRALAYNAAALILCHNHPSGSVEPSAADRKLTRLLQKALEVV DVRVLDHIIVGDGDPLSMAEYGWM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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