Pseudomonas sp. KG01, ACR52_RS09250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd17535 REC_NarL-like - - 1 117 2.59002E-29
Gene3D G3DSA:3.40.50.2300 - - - 1 217 9.0E-39
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1 113 5.4E-12
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 159 215 3.575E-15
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2 114 3.8E-14
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 151 217 9.18E-16
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 159 173 1.3E-6
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 158 210 7.5E-12
PANTHER PTHR43214 TWO-COMPONENT RESPONSE REGULATOR IPR039420 Transcriptional regulatory protein WalR-like 2 215 1.2E-29
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2 128 3.56E-19
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 156 213 1.5E-13
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 189 201 1.3E-6
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 173 189 1.3E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.