Pseudomonas sp. KG01, ACR52_RS09230
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCAGGGCCACGGCAAACCGATCCTGCAATTCGGCAAGCTCAACGTCGGCCTGACCAAGATAGAACCGGCCGGTCAGTACGCACTGAAATTGACCTTCGA CGACGGCCATGACAGCGGGCTGTTCACCTGGGACTACCTCTACCAACTGGCCGTGCGTCAGGAAGCACTGTGGGCCGATTATCTTGCCGAGCTTAAGGCC GCCGGCAAAACCCGCGATCCAAGCCAGTCAGTCGTGCGGCTGATGCTCTAGCACAGGCCTCTCGCTCTTTAGAGGGCATTTTCTAATTTCATCTGTTTGA ATGCCCTGTCTCGCGGCCAACGACTGGCCCGCTTGCGAAAAAAATTAAACTCGGGTAACCAATGGAACTGGCAAGTTCCCTGCATTTGACGATGCGGTAT CAACGGTCACCCGAGTCGCAGTACCAGGCTTGTGTTGTGTATCGAAATGGGGTGCACAGCGGTACCCGGTACTCGTCTTTCGGACAATGGAGCGTCGTAG
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| DNA Sequence for Gene |
>ACR52_RS09230
ATGAGTAACAAGAATAACGATGACTTGAAACGCCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGATCATCGCGTTACGAAAAAAGGATTTATTGGCCT CGGCGAAGATGGTGCTGACCCAAGCCATCAAGCAACCGTTGCACAGCGTCAAGCACGTCGCCCACTTTGGCGTCGAATTGAAGAACGTGATGTTCGGCAA ATCGAAGCTGGTACCCGAAGGCGACGACCGTCGCTTTCACGACCCGGCGTGGAGCCAGAACCCGCTCTACAAACGTTACCTGCAAACCTACCTGGCGTGG CGCAAGGAACTGCACGACTGGATCGGCGACAGCAACCTGTCGGCGCAGGACATCAGCCGCGGCCACTTCGTGATCAACCTGATGACCGAAGCCATGGCCC CGACCAACAGCGCTGCCAACCCGGCGGCGGTCAAACGCTTCTTTGAAACCGGCGGCAAAAGCCTGCTCGACGGCCTGTCCCACCTGGCCAAGGACATGGT GCACAACGGCGGCATGCCGAGCCAGGTCAACATGGACGCCTTTGAAGTGGGCAAGAGCCTGGGCACCACCGAAGGCGCAGTGGTGTTTCGCAATGACGTG CTGGAGCTGATCCAGTACAAGCCGATCACCGAACAGGTGCACGAACGCCCGCTGCTGGTGGTACCGCCGCAGATCAACAAATTCTATGTCTTCGACCTGA GCCCGGAAAAAAGCCTGGCGCGCTTCTGCCTGCGTAACGGTCAGCAGACCTTTATCGTCAGTTGGCGCAACCCGACCAAGGCCCAGCGAGAGTGGGGCCT GTCGACCTATATCGAGGCGCTCAAGGAAGCGGTCGATGTGGTCACGGCGATTACCGGCAGTAAAGACATCAACATGCTTGGCGCCTGCTCCGGCGGCATT ACCTGTACCGCCCTGCTCGGCCATTACGCGGCGCTGGGCGAGAAGAAGGTCAACGCCCTGACCCTGCTGGTGAGCGTGTTGGACACCACCCTGGACACCC AGGTGGCGCTGTTTGTCGACGAGCAGACCCTGGAAGCGGCCAAGCGCCATTCCTACCAGGCCGGAGTGCTGGAAGGCCGCGACATGGCCAAGGTGTTTGC GTGGATGCGCCCCAACGACCTGATCTGGAACTACTGGGTCAATAACTACCTGCTGGGCAACGAGCCGCCGGTGTTCGACATCCTGTTCTGGAACAACGAC ACCACGCGCTTGCCGGCGGCCTTCCACGGCGACCTGATCGAGTTGTTCAAGAACAACCCGCTGGTACGCGCCAACGCCCTGGAGGTGTGCGGCACGCCGA TCGACCTCAAGCAGGTCACCGCCGACATCTACTCCCTGGCGGGCACCAACGACCACATCACGCCGTGGCAGTCGTGCTACAAGTCGGCGCAGCTGTTTGG CGGCAAGGTGGAGTTTGTGCTGTCCAGCAGCGGGCATATCCAGAGCATTCTCAACCCGCCGGGCAACCCCAAGGCGCGTTACCAGACCAGCGACAGCATG GCGGGCAAGGCGCTGGAGTGGCAGGAAAATGCGACCAAGCACACCGATTCCTGGTGGCTGCATTGGCAGGTGTGGCAGGCGGAGCGGGCGGGGAAGTTGA AGAAGGCGCCGACGAGTTTGGGTAACAAGACTTACGCAGCAGCTGAAGCAGCGCCGGGGACGTATGTACACGAACGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACACACTTTTTTTGGATTGAAATGGGATCAAATGTGGGAGGGGGCTTGCTCCCGATGGCAGTGTGTCAGTATCAGACGTGCTGACTGACACACTGCCAT CGGGAGCAAGCCCCCTCCCACATTTGGAGTGCATTCCAGCTGTAACACTTCACAGGGCTTGAGCATGCCGCAACCGTTCATCTTCCGCACCATCGACCTG GATGGCCAAGCCATCCGCACGGCGGTACGACCGGGCAAGCCTCACTTGACGCCGCTGCTGATCTTCAACGGCATCGGCGCCAACCTTGAGCTAGTGTTTC CGTTCGTCCAGGCACTGGACCCGGACCTGGAAGTGATCGCCTTCGATGTGCCGGGCGTCGGCGGCTCGTCCACGCCCAAGCGGCCGTATCGCTTTCCCGG CCTGGCCAAACTGACCGCGCGCATGCTCGATTACCTCGACTATGGCCAGGTGAACGCGGTGGGGGTGTCGTGGGGCGGCGCACTGGCGCAGCAATTCGCC
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| Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MSNKNNDDLKRQASENTLGLNPIIALRKKDLLASAKMVLTQAIKQPLHSVKHVAHFGVELKNVMFGKSKLVPEGDDRRFHDPAWSQNPLYKRYLQTYLAW RKELHDWIGDSNLSAQDISRGHFVINLMTEAMAPTNSAANPAAVKRFFETGGKSLLDGLSHLAKDMVHNGGMPSQVNMDAFEVGKSLGTTEGAVVFRNDV LELIQYKPITEQVHERPLLVVPPQINKFYVFDLSPEKSLARFCLRNGQQTFIVSWRNPTKAQREWGLSTYIEALKEAVDVVTAITGSKDINMLGACSGGI TCTALLGHYAALGEKKVNALTLLVSVLDTTLDTQVALFVDEQTLEAAKRHSYQAGVLEGRDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNND TTRLPAAFHGDLIELFKNNPLVRANALEVCGTPIDLKQVTADIYSLAGTNDHITPWQSCYKSAQLFGGKVEFVLSSSGHIQSILNPPGNPKARYQTSDSM AGKALEWQENATKHTDSWWLHWQVWQAERAGKLKKAPTSLGNKTYAAAEAAPGTYVHER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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