Strain | Pseudomonas sp. KG01 sole5_c36, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCGACTTCGTCAGCGGCAACAACGACGCCGACGCGGTGCTGTTGCTGCAATGGGTGCACGCTCATCTGCCCGAGCACTACCCGCAGCTGGAACAGCTGC TGCACGACTGGGGCGGCAACGCCTCGGGCAGCGGCATCGCGAATATCGACAACACCGGCGAGGTGCACCCCGACACCTACTGGTGGCAGCACTCGGTGGG CAACGTGCGCAACACCACCTTCCGCCAGCTGTGGCTGGACCAACCCGACCCGCTGCTGCTGCGCCTGCGCGAACACCCGCGCAGCATCGGCGGGCGTTGT GCCGAGTGCCGCTGGCTGCCGATCTGCAACGGCAATACGCGCACCCGTGCCTGGGCCGATGGCGACCTCTGGGGCCCGGACCCCGGTTGCTACTTCAGCG ACGCCGAGATCACCTCGCAACCTTCTGCCCAGATCCCTTGCTCGACCACCCGGTGACACAACCGGGGGCCGCCTACCTGATGATGAACCAAGGACGTCTC
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DNA Sequence for Gene |
>ACR52_RS25720
ATGCACACTTCAACCGCCCTACCTGCCAGTTTGCACAGCGCGTTCCAACCCGGCGAAGTCGCGTTAGTCGGTGCCGGCCCCGGCGACCCATGCCTGTTGA CGCTGCGTGCCTGGAGCCTGTTGATGCAGGCCGATGCCGTGGTCTTCGACCGACTGGTCAGCGCCGAGTTGCTGACCCTGATCCCCCTGACGTGCGCCCG CCACTACGTGGGCAAGGCCAGCGGCTGCCATAGCCTGCCCCAGGGTCAACTCAACGAACTGCTGGCCGAACTGGCCGACCAGGGCCTGCGCGTGGTGCGC CTCAAGGGCGGCGACCCGTTCATCTTCGGGCGCGGCGCCGAGGAATTGGAGTACCTGTTGGCACGCGGCATTCCCTGCCAGGTGGTGCCGGGCATCACCG CCGCGTCCGGGTGCAGCGCCTATGCCGGTATCCCGCTGACCCACCGCGACCTGGTCAACTCCTGTCGGTTCGTCACCGGGCACCTGCAGCGCGACGGCGC GTTGAAGCTGCCGTGGGCAAGCCTCGCGGAGCCGAGCCAGACGCTGGTGTTCTACATGGGCCTGTCGAACCTGGCGCTGATCGCCGAGCACCTGGTGGCA GCGGGGCTGCCGGGGGATACGCCGGCGGCGTTGATCAGCAACGGCGCCCGCGCCGACCAGCGTGTGGCCCGTGGCACCCTGCGCCAATTACCGACCCTGG CCGCCGACTGCGAACCCGGCGTGCCCACGTTGACGGTGATCGGCCAGGTGGTGAACCTGTTTGCCGGGGCCGCCCTGCACTACCCGGCCAGCCTGTCGCC GGCCCGTGAATCGGTGGCGGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AACGCCTGCTGCTGGTGCCGTTGCTGTGGGCCGGCGCCGCGCACAGCACGCCGGCGGAGGACTATCACCTCCACTGCGAAAGCTGCCATGGCCTCAACCG CATCGGCGCCACCGGCCCGGCGCTGCTTCCGGAAAGCCTCGGGCGGATCAAGCCAGAGGAGGTACGCAAGGTCATCGAACAAGGCCGCCCCGCCAGCCAG ATGGCGGCCTTCGCGCCGCAACTGAGCGCCGCGCAAATCGATGGCCTGGCGAGTTTCCTGCAACAACCGCCGGCCTCACCGGCCACCTGGGATGAGCGCG ACATCCGTAACAGCCACAGGCTGCTGGCCGATGTAAACCAACTGCCCACCACCCCTCAACACCACGCCGACCCGCTCAACCTGTTTGTGGTGGTGGAATC GGGTGACCATCACATCGACATTCTCGACGGCAACACCTTTGCCGTGCTGGACCGTTTCCCCACCCACTTCGCGGTGCACGGCGGGCCGAAATTCTCCCCC
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Amino Acid Sequence |
>uroporphyrin-III methyltransferase
MHTSTALPASLHSAFQPGEVALVGAGPGDPCLLTLRAWSLLMQADAVVFDRLVSAELLTLIPLTCARHYVGKASGCHSLPQGQLNELLAELADQGLRVVR LKGGDPFIFGRGAEELEYLLARGIPCQVVPGITAASGCSAYAGIPLTHRDLVNSCRFVTGHLQRDGALKLPWASLAEPSQTLVFYMGLSNLALIAEHLVA AGLPGDTPAALISNGARADQRVARGTLRQLPTLAADCEPGVPTLTVIGQVVNLFAGAALHYPASLSPARESVAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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