Pseudomonas sp. KG01, ACR52_RS23520
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCTGCGCGCCGAATCGGACATTCCGATCCTGATGCTCACCGCCCGCTGCGAACCCACCGACCGCATCATAGGCCTGGAGCTGGGCGCCGACGACTACA TGTCCAAGCCATTCGAGCCCCGTGAGCTGGTGGCGCGCATCCAGACCATCCTGCGCCGCGTGCGCGATGATCGCACCGAGCAGCGCGCCAATATCCGCTT TGATAACTGGCGCCTGAACAGCGTATTGCGCCAGCTGGTGGCCGACGATGGACTGGTGGTGCCGCTGTCCAACGCCGAGTTCCGCCTGTTGTGGGTGTTT ATCGAACGCCCGCGCCGGGTACTCAGCCGTGAACAATTGCTGGATGCGGCGCGGGGCCGGTCCATTGAAGCCTTTGATCGCAGCATCGACTTGCTGGTGT CGCGCCTGCGCCAGAAGCTCGGGGATGATCCAAAAGCCCCACAGTTGATCAAGACCGTGCGCGGCGAAGGCTACCTGTTCGACGCCCGGGATATCGGCTG
|
|
| DNA Sequence for Gene |
>ACR52_RS23520
ATGCGCAACGCCTTCAATACGCTGTTTGGACGGCTGTTCGGCGTATTGCTGGTGGCAATTGTGCTGGCTCATGCGCTGGCGTTCTTCTGGTTTCACCATT ACGGCCCGCCACCGCCGCCGCCCCAGGAAACCTTCATCGAACAGCCAGACGGCACGATGAAGCCCTTGCCCAGGCATCACCGTTCCTGGTTTGGCGGCCC GGTTGTGCCGCTGACGTTTCAATTTTTCTCGCTGATCATCGCCGCCTGGTACGGCGCCAAACTGCTGAGCCGGCCGATCCAGCGCCTGAGCGAAGCGGCC GAACGTTTGAGCCTCGACCTCGACAGCCCGCCGCTCAACGAATCCGGGCCTCGGGAATCGCGGCAGGCAGCCTCGACGTTCAACCTGATGCAAAAGCGCA TTCGCGAGCAGGTCAGCCAGCGTGCGCGCATGCTCGGCGCGGTTTCCCACGACCTGCGCACCCCGCTGTCGCGCCTCAAACTGCGCCTGGAACAGATCGA AGACACCAAGCTGCAAGGGCAGATGCGCCAGGACCTGAACGACATGATCGGCATGCTCGATGCCACCCTGAGCTACCTGCATGAACAGCGCACCAGCGAA ACCCGGCACTGGCTGGATGTGCAGGCGCTGGTGGAGTCCATGAGCGAAAACGCCCAGGACCAGGGCGCCGATGTGCAATTCGCGGGGACTTGCGTGCCTT TGCAGGTGCAGCCGATGGCCCTGCGCTCGTGCCTGAACAACCTGATCGACAACGCCTTGCGTTATGCCGGTACAGCGCGCATCGAACTGACGGACAGCCG CGAAGCGTTGGTCATCCGCGTGATCGACCACGGGCCGGGCATTGCGGCGGACAAGCGCGAAGCGGTGTTCGAGCCGTTTTATCGGCTGGAAGGCTCGCGT AACCGCAACTCCGGCGGCGTCGGCCTGGGTATGACGATTTCCAAGGATGCCGTGGAACGCCTCGGCGGCCGCCTGAACCTGGAAGAAACCCCAGGCGGCG GCCTGACCGCGGTAATGTGGCTCCCCCGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAAACCAACCCCGCTTACTGTAGGAGCCGGCTTGCCGGCTCTTACAGGTTCAGGTTACAGCGGTTTGTCTTCTCGCCGCCCTTGAGCCTGGGTCGCGCTC CAGTCCATCAGCAGGCTGTACGCCACTGCCAGCAAGGTGGGGCCGATAAACAGGCCGATGAAACCAAAGGCGATCAGCCCGCCGAACACCCCGAGCAGCA CGATCACCAGCGGCAGATTGCCGCCACGGCTGATCAGGTACGGCTTGAGCACGTTGTCCACGCCACTGATGATGAACGTGCCCCAAACGCCGAGGAACAC CGCGTAGGTGTAGTCGCCCTTCCACGCCAGCCAGGCAGTGGCGGGGATCCACACCAGCGGCGGCCCCATGGGGATCAGGCTGAGCAGGAACGTGACAACC CCCAGCACCAGCGCGCCCGGCACACCGGCGATCAGGAAGCCGATCAGTGCCAGCACCGCCTGGGCAGCGGCGGTGCCAATCACGCCATTGACCACCCGTT
|
|
| Amino Acid Sequence |
>histidine kinase
MRNAFNTLFGRLFGVLLVAIVLAHALAFFWFHHYGPPPPPPQETFIEQPDGTMKPLPRHHRSWFGGPVVPLTFQFFSLIIAAWYGAKLLSRPIQRLSEAA ERLSLDLDSPPLNESGPRESRQAASTFNLMQKRIREQVSQRARMLGAVSHDLRTPLSRLKLRLEQIEDTKLQGQMRQDLNDMIGMLDATLSYLHEQRTSE TRHWLDVQALVESMSENAQDQGADVQFAGTCVPLQVQPMALRSCLNNLIDNALRYAGTARIELTDSREALVIRVIDHGPGIAADKREAVFEPFYRLEGSR NRNSGGVGLGMTISKDAVERLGGRLNLEETPGGGLTAVMWLPRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|