Strain | Pseudomonas sp. KG01 sole5_c29, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAAAGTGTGTCTGAGTAAACCATTGTGGACCGCGCACGACTGTTCAAGACAGAACCCGCACACTAATTTTGCATTAACTGCCCATCAGAGTACGGGTGAA ACTTCGTTGTGAACTTCCCGAAGCCCCTGAACAGTAGCCATGCAAAAAACATTCAGCAAGCAACAAAATCCTACTTAAGGAATTTCCTACAACCGCCGCA ATACAGCATCTGCGCAGCATTTTGCACAGTTTGGCCACCACAACTAACCCACTCCCTCCGCAAGACTTAACGCCTAAACGCTCAAAAACCAACGGCAACT AATTGCACACTTATGCGCAAGTTAAACCCCAAAAACGCAGCGCCAATTTACACCCACTTATTAAAAACCAGTGCGCACATCACCCCGACCTTTGTTTCAT TGGCCCTCGTACTTTCAGGCACGCTTCTTGTTATAGGGAACTTCCCACTCGGTTCAATCGCCGTATGGAACTCCCTATCAACAAGGCAAGGAAACCCGTC
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DNA Sequence for Gene |
>ACR52_RS22070
ATGCCAACACCCGCGTATCTCTCCATTACCGGCGTCAAGCAAGGTTTGATCACGGCAGGCACTTTTACCCAGGATTCGGTAGGCAACATTTACCAGGAGG GCCATGAAGACCAGATCCTCGTCCAGGCGTTTGCTCACCAGGTGATCATTCCCCGAGACCCACAGTCCGGCCAGCCAACCGGCCAAAGGGTCCACAAGCC ATTGATGATCAGCAAGGTCTTCGACAAGTCGTCACCGCTGCTATTCAGCGCGCTGACCAGCGGTGAGGAGGTCAAATGCCGCCTGGAGTGGTTTCGCACC TCATCGGCGGGAACGCAGGAGCACTATTTCACCATCGAACTCGAGGGGGCGACCCTCGTCGACATTCAGTCGCGCATGCCCAATTGCCAGGACCCGGACA ACGCGCACTTCACCCACCTGGAAGACGTGTACTTCACCTATCGCAAGATCGTCTGGACCCATGAAGTCTCCGGCACCTCCGGCTCAGACGACTGGCGCAG CCCGGTGGCTGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCTGCCTGAGGCAGAAGCGGCAACCAGGGACGGCGCCGTTTCTGCCGGGCTGTCATACCATCGCCAGCGGATGCTTGCGCTTGGGCGCACCGAACACTC GGTCGATAGCGTCCAGGTCATGTTCGTCCAGCACCAGTTTCACAGCGCCGGCGTTGAGGCGTACATGCTCAGGCGTGACCGCCTTGGGGATCGCAATCAC CCCGTCCTGGCGTAAAACCCACGCCAGGGACACCTGGGCCGGTGTGACTTCATGACGGTGAGCGATTTGCTTGAGCGTCGGGCTGGCCAGCAGCTCACCG CCCTGGGCGATCGGACAATAGGCCATCAAGGGCAAGTGATGTTGTTGCCACCAAGGCAGAAGGTCGAATTCGATACCGCGCTCTTCAATGTTGTAGAGCA CCTGGTTGGTCGCGCAGGCCGGCGAGGCAAGTTCCTGCAGGTCGGCGACATCAAAATTGGAAACACCCCAACGGCCGATCTTGCCGGCCTCGCGCAAGCG
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Amino Acid Sequence |
>Major exported protein
MPTPAYLSITGVKQGLITAGTFTQDSVGNIYQEGHEDQILVQAFAHQVIIPRDPQSGQPTGQRVHKPLMISKVFDKSSPLLFSALTSGEEVKCRLEWFRT SSAGTQEHYFTIELEGATLVDIQSRMPNCQDPDNAHFTHLEDVYFTYRKIVWTHEVSGTSGSDDWRSPVAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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