Pseudomonas sp. KG01, ACR52_RS18435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c22, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACAACCCCAACATCAAGTTCATGTTCATCTACATCGTGCTGTTCCTGGTGGTGCTGGCCGTGCTGTACATCAAGCATCGCCTGACCCGCATGCCGGTCG GTCGTGCCTGGGAAGCGTTGCGCGAAGATGAAATCGCTTGCCGCTCCATGGGCCTGAACCATGTGCTGGTCAAGCTCTCGGCGTTCACTATCGGCGCGTC CACAGCCGGTTTGGCCGGGGTGTTTTTCGCCAGCTATCAGGGCTTCGTCAACCCGTCGTCGTTCACCTTCTTTGAGTCGGCGTTGATCCTGGCCATCGTG GTACTGGGCGGCATGGGCTCGACCGTCGGTGTGGTGATCGCGGCGTTCGTCTTGACCGTTGCGCCTGAACTGCTGCGCAGCTTCTCCGAATACCGCGTGC TGCTGTTTGGCGTGTTGATGGTGGTGATGATGATCTGGCGACCGCGCGGCCTGATCCGGATCAGCCGAACTGGTGTAACACCACGTAAAGGAGTGGCGCC
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| DNA Sequence for Gene |
>ACR52_RS18435
ATGAGCAAGGAAGTCGTCCTGTCCGTGGAACACCTGATGATGCACTTCGGAGGCATCAAGGCCTTGAGCGATGTAAGCCTCAAGGTCGAACGCAACTCGA TCTTCGCCTTGATCGGCCCCAACGGTGCCGGCAAGACCACGGTGTTCAACTGCCTCACCGGCTTCTACAAAGCCAGTGGCGGCAAGATCGAACTCAACGT GCGCGGCCAGCAGACCAACGTGATCCAGTTGCTCGGCGAGCGCTTCAAGGCCGTCGACTTTGTGTCGCCGAAAAGCTTTCTCAGCCGTGTGTACTACAAG ATGTTCGGCGGCACCCATTTGGTGAACCGCGCCGGGCTGGCTCGTACGTTCCAGAACATTCGCCTGTTCAAGGAAATGTCGGTGCTGGAAAACCTGCTGG TGGCCCAACACATGTGGGTCAACCGCAACATGCTCGCGGGCATCCTCAACACCAAGGGCTACCGCAAGGCTGAAAGCGACGCCCTCGACCACGCCTTCTA CTGGTTGGAAGTGGTGGACCTGGTGGACTGTGCCAACCGCCTCGCCGGCGAACTCTCCTACGGCCAGCAGCGCCGCCTGGAAATCGCCCGCGCCATGTGC ACCCGGCCGCAGATCATCTGCCTGGACGAACCGGCGGCGGGCCTCAACCCCCAGGAAACCGAAGCCCTCAGCGCGATGATTCGCCTGTTGCGCGACGAAC ACGACCTCACGGTGGTGCTGATTGAACACGACATGGGCATGGTGATGAGTATTTCCGACCACATCGTGGTGCTCGACCACGGCAACGTGATCGCCGAGGG CGGCCCGGAAGCGATCCGCAACGACCCGAAAGTGATTGCCGCCTACCTGGGCGCGGATGAAGAGGAGCTGGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCACCTATCCTCGAAATGAAGGACCTGGACGTGTTTTATGGCCCGATCCAGGCCCTGAAAAAGGTCTCGCTGTACATCAACGAAGGCGAAACTGTCAG CCTGATCGGCTCCAATGGCGCGGGTAAATCCACGCTGCTGATGTCGATCTTCGGCCAACCACGGGCCGAGTCGGGGCAGATCCTCTATAACGGCGTCGAC ATTACCCACAAGTCGTCCCACTACATCGCCTCCAACGGCATTGCGCAGTCGCCGGAAGGGCGGCGGGTGTTCCCCGACATGACTGTCGAGGAAAACCTGC TGATGGGCACCATCCCGATTGGCGACAAGTATGCTGCGCAGGACATGCAGCGCATGTTCGAGCTGTTCCCACGGCTCAAGGAGCGGCGTACCCAGCGCGC CATGACCATGTCGGGCGGCGAACAGCAAATGCTCGCCATCGCCCGTGCACTGATGAGCCGGCCCAAGCTGTTGCTGCTGGACGAGCCGAGCCTGGGTCTG
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| Amino Acid Sequence |
>ABC transporter
MSKEVVLSVEHLMMHFGGIKALSDVSLKVERNSIFALIGPNGAGKTTVFNCLTGFYKASGGKIELNVRGQQTNVIQLLGERFKAVDFVSPKSFLSRVYYK MFGGTHLVNRAGLARTFQNIRLFKEMSVLENLLVAQHMWVNRNMLAGILNTKGYRKAESDALDHAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMC TRPQIICLDEPAAGLNPQETEALSAMIRLLRDEHDLTVVLIEHDMGMVMSISDHIVVLDHGNVIAEGGPEAIRNDPKVIAAYLGADEEELV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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