Strain | Pseudomonas sp. KG01 sole5_c22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACGCCACAGCCCATGACAAGACCATGCCGGCCTTCCTGAAAAAGGAAAACGCCAACCAGGTGCCGGTCAATGCGCTGTGGCTGACGAACGTGATGATCC AGGCCTTCCTGGTGATCACGCTGTTTTCCCACAGCACCTACACCAGCCTGATTTACCTCGCTTCGTCGATGATTCTGGTGCCCTACCTGTGGTCGGCGGC TTATGCCGTGCTGTTGAGTGGGCGCGGCGAAACCTATGAAGGCGCCCAACACCACCGCGTGAAGGACTTGCTGGTGGGCCTGACGGCCCTCGGCTATGCC GTGTGGCTGCTTTACGCGGGTGGTTTGAAATACCTGCTGCTGTCGGCGTTGCTCTACGCGCCGGGAGTGGTGTTGTTTGCCCTGGCCAAGCGCGAGCAGG GCCTGCCCTTGTTCACGCATGTGGAAAAAGGCATTTTCGCCTGCGTGATTGCAGGCGCAGGGCTGGCGGCGTATGGGCTGTATAGCGGGGTGTTGTCGTT
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DNA Sequence for Gene |
>ACR52_RS17620
GTGAGACTGGCCTATCAACCGCCCTATGACTGGGCGGCCATGTTGGGGTTTTTAGCCGCGCGGGCGATCACTGGGTTGGAGACGGTGGTGGCGGGCGTGT ATCGGCGCAGTATCAGCGTGGGCGAGCAGCATGGCTGGATCAGCGTCGCGCCAGGTTCGGGAGATTGGCTGGAGGTAACGATCGACTTTCCTGACCCTGC GGCGTTGCCCGAGATCGAGCGACGGCTGCGCCGGATGTTTGATGTGGACGCCCAGCCTGAGTTGATCAACCCGCAGTTGGCGAAAGACCCATTGATGGCG CAACTGGTCGCGGCTCGCCCGGGCCTGCGGCTGCCAGGCACGTGGGATGGCCTGGAGTTGGCGATCCGCGCGGTGCTGGGCCAGCAAATTACGGTGGCGG CGGCGATCCGCCTGGCGGGAAAGTTGGTCGCGCAGTACGGCCAGCCGCTGGAGACACCGCATGACGGGATCACCTATGTGTTCCCTATGCCCGATGTCTT GGCGGCAGCGGACCTGGCTACGTTGGGCATGCCCAAAGCCCGAGGCCGAACGTTGTCCGGTGTCGCCCAGGCGTTGCTGGATGACCCTGAATTATTTCAA CCCAAGGCCAGCCTCAAGGAAGGCGTGGCGCGCTTGGTGGCCTTGCCGGGGATTGGCGACTGGACGGCGCAGTACATCGCCATGCGCCAGTTGCGCGAGG CGGATGCATTTGCGTCGGGGGATATCGGCTTGATCAATGCGCTGGCGGCGCTCGAGGGTGGGCCGGTTTCGGCGCGGCAGTTGTTGGCGCGGGCTGAAGC GTGGCGACCGCTGAGGGCGTATGCGGCGCAGCATTTGTGGACGTCGTTGAGCCGGGCGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGCGGATGTGAGGGCCTCATCGCGAGCAAGCCCGCTCCCACATTTGTACCGTGCACATCTTTTGGAATGCGGTCGAATGTGGGAGCGGGCTTGCTCGCG ATAGCGGTAGTCAGCTCACCACTGCGGCCGATGCGAGCCCAATTCCCCCGCCGGCAAATCCCACTGCAACGGTGTGCCGCTGATGGTCACCGGCGGCAAC AATCGATGCGCCGGCCCCCAACTGGTTTGTTCCTCCACCACCCCTTGATCCTCTGCCTCTTCGGCTCGCAGCGCCGGCTGTTCCGGCACCTGACCCGCGT CCACCAACAACTTCGCCGTGCGCGCCAATGACAACCGCGCCGAGCCGCCACGGCCGGATTTCAATCGCTCGCTCAACGCCTGGATCGCACTGGCCGCCAT CAAATACCCGGTTGCATGATCCAGCGCCTGCAACGGCAGTGGCACCGGTTTGTCAGCCTGCTTCCAGGCCATGCCCGCAACGGCGATCCCGCTGCTCATC
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Amino Acid Sequence |
>DNA-3-methyladenine glycosylase
MRLAYQPPYDWAAMLGFLAARAITGLETVVAGVYRRSISVGEQHGWISVAPGSGDWLEVTIDFPDPAALPEIERRLRRMFDVDAQPELINPQLAKDPLMA QLVAARPGLRLPGTWDGLELAIRAVLGQQITVAAAIRLAGKLVAQYGQPLETPHDGITYVFPMPDVLAAADLATLGMPKARGRTLSGVAQALLDDPELFQ PKASLKEGVARLVALPGIGDWTAQYIAMRQLREADAFASGDIGLINALAALEGGPVSARQLLARAEAWRPLRAYAAQHLWTSLSRAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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