Pseudomonas sp. KG01, ACR52_RS05160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTTGCTCTGCTCTCTCTGCCAGCAGCAGCATCGGATTTGCCTAGCCAGCCAGTTCTGACGCTTGCCGCCGCTCAACAGATCCTCACAGCAGCGCAAAC AAAAGCGCAAAAGGCTGGTTGGCCGTGCGTGATCGCAGTTGTCGATAGTGCTGGTTTGCCTATTCTCCTCGCTCGAATGGACAACGCCGCTGTCCCTGCG GGTGTAGAACTGGCTCCCGGAAAAGCTCGTACAGCCGCTCTGTTCCGACGTCCCAGCGGCGCGCTAGAAGATGCCATCAACGGCACCCGACCTGCCGCAA TCACCGCCCAAGGCTTTGTGCTGATGCGTGGTGGTTTTCCGATCATCATCAACGGACACACCGTTGGGGCTGTAGGGGTATCTGCGGACACACCACAGCA CGATGAAGAGATCGCTCAAGCCGGGCTAGCTGCATTTAAATAAACGCCCATTTCAAAAAGTGCAGTTACCGCTCCCGTTATCAGAAGAGACTGTCATTCC
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| DNA Sequence for Gene |
>ACR52_RS05160
ATGAGAAAAGAAGCGGCCATACTGGTTGTCGCGTCGGCGGGCTGTGCCATGACAGTTCTAGATACGAACGTCGTAGGCATCGTTTTGCCAACCATTGCCA GGGATCTTCAGGCATCGTTTGCAGAGGTCGAGTGGGTCATAAGCACCTACGTGCTCTGCTTCGCTGCCCTCCTGCTTCCGGCTGGTTCCATCGCTGACCG GTATGGCCGACGACGCGTCTTTCTGTTCGGAATAGCGCTCTTTGCAGTCTCTTCTCTGGCATGTGGTTTGGCGCCTTCAGCGTCAGGCCTTTATCTGGCG CGAGCGGTACAGGGAGTCGGAGCCGCTTTCCTGCTTGCTCCTGCCCTAGCAATCATCGGACACACTTTTCACGATGAAAACGAGCGCAGCCACGCATGGG CGATATGGGGCGGCATCATGGGACTCACAATGGTTGTCTCGCCGCTCATTGGTGGAGTGATCAGCAGTTCACTTGGGTGGCGCTGGGCTTTCTATATCAA CATCCCGGTCTGCTTATTGCTGGCGGCAGCGGTCGTGACGCTGGTGGATGAATCTCGTGACCCCATTCCGAGAACTCTGGACATCCCGGGAATTGCGCTT TTCGCGCTAGGGATGTTCAGTGCCACATGGGCACTCATAGCCGGTCCCAGTCATGGATGGTCCAGTATCCCTGTCCTCGTGAGCATGATCGGGGGCCTGC TGTTTTTCGCAGTCTTTGTCTGGGTCGAAAAACGTCGTACCCACCCAATGCTTGATCTCGAATTGTTCACAGCCAGGCCCTTCGTTGGCGCAGTACTCGC GATGCTAGCCTATGCCTCATCTGCTCAAGTCATGGCATCGCTGTTACCGCTCTTTCTACAAAATGGCCGTGGCAACGGAGTACTCCAAGCGGGTATCGCC ATGCTTCCATTTGCCATTGCGATGCTGATTTTCCCCCAAGTAGGTAGGCGACTTTCGCCTTACCTTGAGAGCGCGGGCATCCTGGCACTGGGCCTCTTAA TCGTTGCACTGGGTAACCTTATTCTGATGTTCGCCGCCATTCAGCAGGGAGAACTATTGCTGATTTCCGGCATGGCTATTTTGGGAACTGGTGGAGGATT GCTGAATGGCGAAACCCAGAAGGCGATCATGGGCACAGTTCCTCGGAGTCGCGCCGGAATGGCATCCGGCATCAGCACCACATCCAGATTCACCGGCATA TTGCTGGGTTTCGCCGGGCTGGGAGCGGTACTCGCCAGCGGAGTGAAATCGGCGGTCGAAAGCAGGCTGATAGACGCGGGAGTGTCTGCTAAACCCGGAT TTTCCGAATACGTGATGGCAGGCGACTTCGAACGTGCTATCGCAATGTATCCCCACGACTTAACCAAAACGCTGAATGGGCTCGCTCAGCAGAGTTACAG CCAGGGATTCGCGGGCGCATTTGTGATTGCCGCTATGTTCTCGCTACTCGCATCCGGTGCGGTGTATGTGCTGATGCGTAGCAAAAAAAGCCATAGCCAG AGCCCTGCCATCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACAGCCCTGCAAAACCTGAGTAAAGATATATGTCGATAAATGAACTGAAAATTGCACACCCGGTTCAGGCCGACGCAATTATTTTTGACCTTGACGGT ACTCTCGTTGACTCTGCGGACGACATGACAGCGCAACTGAACGCAATTCTGATCGAGCGGAATCTTGAGCCAATTTTGGTCGCAAAAACTTCATTATTCC TCGGTGACGGAATGCGATCATTTGCCAGGCGAGCGTTCTACTTGCGTGGAATAAATGACATGGAAGAAGCGATTGATACCTTCATCTCGCGTTACGAACA CACTGACCATCCGATGACAAAACCTTATGACGGGGTAATTGAAACCCTTAGCGCGTTGCGAGAAGCGGGGTGGCAAATATCTGTCTGTACGAATAAGGAC GAATCGATTGCCATCGATATTCTCAAGCAAACCAACCTGTTGAAATTTATGGATGTGGTCTGTGGCGGGGATACCGTGTCCTTTAAGAAGCCTGACCCCA
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| Amino Acid Sequence |
>major facilitator transporter
MRKEAAILVVASAGCAMTVLDTNVVGIVLPTIARDLQASFAEVEWVISTYVLCFAALLLPAGSIADRYGRRRVFLFGIALFAVSSLACGLAPSASGLYLA RAVQGVGAAFLLAPALAIIGHTFHDENERSHAWAIWGGIMGLTMVVSPLIGGVISSSLGWRWAFYINIPVCLLLAAAVVTLVDESRDPIPRTLDIPGIAL FALGMFSATWALIAGPSHGWSSIPVLVSMIGGLLFFAVFVWVEKRRTHPMLDLELFTARPFVGAVLAMLAYASSAQVMASLLPLFLQNGRGNGVLQAGIA MLPFAIAMLIFPQVGRRLSPYLESAGILALGLLIVALGNLILMFAAIQQGELLLISGMAILGTGGGLLNGETQKAIMGTVPRSRAGMASGISTTSRFTGI LLGFAGLGAVLASGVKSAVESRLIDAGVSAKPGFSEYVMAGDFERAIAMYPHDLTKTLNGLAQQSYSQGFAGAFVIAAMFSLLASGAVYVLMRSKKSHSQ SPAI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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