Pseudomonas sp. KG01, ACR52_RS04295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGACATGCTGGTGTTTGCCCGCGGCGAATTGCCGCTGACCGACCGCGTCACGCCGTCCGGATTGATGCAGTCTTTGCAAGCGGCGGCCGCCACGCATAT CCAGGACGTCAATGTGCGCTGGCAGTGTGACAGCCGCCTCGGCGAATTGCTGTGCAACCGCGACACCCTGGTGGGGGCGTTGCTCAACCTGATCGAAAAC GCGACCCAGGCCAGCGGCCCCGGCGCGCGGCTCAAGGTGCACCTGTACACCCGCGAGCAAACCCTGCGCCTGTGCATCAGCGACAGCGGCAGCGGCATCC CCCCGGCGGTGCTGCAGCGCCTGGGCGAACCTTTTTTTACCACCAAGACCAACGGCACAGGCCTGGGCCTGACCGTGGTCAAGGCCGTGGCGCGTGCTCA TCAGGGAGAATTGCAACTGCATTCCCGCTTGGGGCGTGGCACGTGTGCATTGATGACCTTGCCGCTGTTTTCAAGCGCGGCAAGCGCGGAGTAAAAGGTT
|
|
| DNA Sequence for Gene |
>ACR52_RS04295
ATGGCTATCAAGGTTTTGTTGGTGGAAGACGATCGCGCCCTGCGTGAGGCATTGGCTGACACGCTGCTGCTGGCGGGCCATGGCTACCGGGCGGTCGGTT CTGCCGAAGAAGCCTTGGAGGCTGTCGAACAGGAGTCCTTCAGCCTGGTAGTCAGCGACGTGAACATGCCGGGCATGGACGGTCACCAGTTGCTTGGCCT GTTACGCGCGCGTCAGCCGCAACTGCCGGTGTTGCTGATGACCGCCCATGGCGCCGTGGAGCGGGCGGTAGACGCCATGCGTCAAGGCGCGGCGGATTAC CTGGTCAAGCCGTTCGAGCCCAAAGCGTTGATCGAACTGGTGGCCCGGCATGCCTTGGGCGTCATCTCGACCACCGAGGGCGAAGGCCCGATTGCGTTCG AGCCGGCCAGCGCACAATTGCTCGAGCTGGCCGCCCGCGTGGCGCGCAGCGATTCCACTGTGTTGATTTCCGGCGAGTCCGGCACCGGCAAGGAAGTGCT GGCGCGCTATATCCACCAGCAATCCAGCCGTGCCAAGCAGCCTTTCATCGCCATCAACTGTGCGGCGATCCCCGACAACATGCTTGAAGCCACTTTGTTC GGCCATGAAAAGGGCTCGTTCACCGGTGCCATCGCGGCGCAGGCGGGCAAGTTCGAACAGGCCGACGGCGGCACCATCCTGCTCGACGAAATCTCGGAAA TGCCCCTGGGCCTGCAAGCCAAGTTGCTGCGGGTGCTGCAGGAGCGTGAAGTGGAGCGGGTGGGCGCGCGCAAGCCGATCCAGCTGGACATCCGCGTGGT TGCCACCACTAACCGCGACCTGTCGGGTGAAGTGGCGGCGGGGCGCTTCCGTGAAGATTTGTTCTACCGGCTCTCGGTATTCCCCCTGGCCTGGCGCCCG CTGCGCGAGCGCCCGGCGGACATCATTCCGCTGGCCGAGCGCCTGCTGAACAACCACGTCAAAAAAATGAAGCACGCCCAGGCACGGCTCTCGGCCGACG CCCAGGCCTGCCTGATCAGCTACCCATGGCCCGGCAACGTGCGGGAACTGGACAACGCGATCCAGCGCGCGCTGATTTTGCAGCAGGGCGGCCTGATCCA GCCCCAGGATTTCTGCCTGGCCATGGGCACAGGCACCGCGCCGTTGCCAAGCCTGGCGCCAGCGGCGGTGGTGGCTGAAACCGAGTCTGCCGGTGCCCTG GGCGATGACCTGCGTCGCCGTGAATTCCAGATGATCATCGACACCCTGCGTTCCGAGCGTGGCCGCCGCAAGGAGGCCGCCGAACGCCTGGGCATCAGCC CGCGCACCCTGCGCTACAAGCTGGCGCAGATGCGCGACGCCGGCATGGATGTCGAAGCCTACCTTTTCTCCACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAGTAACAAAGCGGACAAGGTTTGTCGCCTTTTCTTACGAGTTGCTACAGAGCTGGCACCCTTGTTGCTACCTCCCCTAGTAATCGCTGCGTAGTGTCA AAAATTTGCGGGTTGTCGGAGAGAGAAGGTCATGAGCCAGGGTATTGAGTTCAATCGATTGATGTTGGATATGCGCTCCATGCAAATGGACGCCATGGCT CAATCGAAATCCGTCGCACCCGCGCCGGAATTGGGCCAAAGCAGTTTCGCCGACATGCTCGGTCAGGCAATCAACAAAGTCAGTGACACCCAGCAGGCTT CCAGCCAATTGGCCAACGCGTTCGAAATCGGCAAAAGCGGCGTGGACCTCACCGATGTGATGGTCGCCTCGCAAAAGGCCAGCGTTTCCTTTCAGGCCTT GACCCAGGTGCGTAACAAGCTGGTTCAGGCTTATCAAGACATCATGCAGATGCCGGTTTAAGGGCGAGATTTAAGTCATGGCAGAAGCAGTCGTGGACAA
|
|
| Amino Acid Sequence |
>Fis family transcriptional regulator
MAIKVLLVEDDRALREALADTLLLAGHGYRAVGSAEEALEAVEQESFSLVVSDVNMPGMDGHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADY LVKPFEPKALIELVARHALGVISTTEGEGPIAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSSRAKQPFIAINCAAIPDNMLEATLF GHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKLLRVLQEREVERVGARKPIQLDIRVVATTNRDLSGEVAAGRFREDLFYRLSVFPLAWRP LRERPADIIPLAERLLNNHVKKMKHAQARLSADAQACLISYPWPGNVRELDNAIQRALILQQGGLIQPQDFCLAMGTGTAPLPSLAPAAVVAETESAGAL GDDLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFST
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|