Pseudomonas sp. KG01, ACR52_RS04065

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. KG01 sole5_c2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGGCTTGATGCAGCCGTGGCGCTTTATCCGCATCAGCGACCGTCACCTGCGTGGGCAGATTCAGCAATTGGTGGAAGAAGAGCGCATGCGCACCGCCG AGGCGTTGGGCGAGCGCTCCGACGACTTCATGAAACTCAAGGTCGAAGGCATCCACGACTGTGCCGAAGTGCTGGTGGCGGCGCTGATGGATGATCGCGA GCGCCACATCTTCGGGCGTCGCACCTTGCCGGAAATGGACATGGCCTCGCTGTCGTGCGCGATCCAGAATCTTTGGCTGGCCGCGCGGGTTGAAGGCCTG GGCATGGGCTGGGTTTCGCTGTTCGAACCCCAAGCCCTCGCCGACCTGCTGTGTTTACCGCCCGGCGCAAAACCCCTGGCGGTGTTGTGCCTGGGGCCAG TCACCGAGTTCTATCCGGCACCGATGTTGCAGCTCGAAGGCTGGACCGAACCGCGGCCGCTGAGTGACATGTTGTATGAGAATGTGTGGGGAGTGAGTCA
DNA Sequence for Gene
>ACR52_RS04065
ATGAGTGTGGCCTTGCTGTGTGTCGCTGCGGTGGCGCTGGATGCGCTGCTGGGTGAACCCAGGCGCTGGCATCCGCTGGTAGCATTCGGCAATTTCGCCG GGCGCATCGAGCAACGTTTCAACAGCGGTGGCCGTGGCTGGCGCAGCCATGGCGTGACTGCGTGGGTTATCGCGGTGGTGCCGCTGACCCTGCTGGCCAC CGCCTTGTCGTGGGCGCCGTATATCGGTTGGGTGCTGGAGATCCTGGCGCTGTACTGCGCCCTCGGCATGCGCAGCCTCGGCGAACACGTGATCCCGGTG GCCCAGGCGCTGCGCAGCGATGATTTGGATGAGGCGCGTAAACGCGTGAGCTACCTGGTCAGCCGTCAGACCAGCGAACTCGACCACACCGAAGTTGCCC GTGCCGCTACCGAATCGGTGCTGGAAAACGGCAGTGACGCGGTGTTTGCCGCTCTGTTCTGGTTTGTAGTTGCCGGTGTGCCGGGAGTCGTGCTCTACCG CCTGAGCAACACCCTCGACGCCATGTGGGGTTATCGCAACGAGCGCTTTGAACGCTTCGGCTGGGCCGCGGCGAAAATCGACGATGTACTGAACTATATT CCGGCACGCCTGGTGGCGTTGACCTACGCCGTGCTCGGCAAAACCCGGCTGGCCCTCAAATGCTGGCGTACCCAGGGCCCGACCTGGGACAGCCCCAATG CCGGGCCGGTGATGGCTGCCGGCGCGGGTGCCTTGGGCGTTGAACTCGGCGGTGCAGCGATTTATCACGGTGAGGTGCACCAGCGCCCGCAACTGGGCGA AGGTCCGGCGGCGGATGCCGACTCTATCGACCGGGGCTGGCAACTGGTGCAGCGCGGCGTCTGGCTGTGGCTGCTGATCCTATGTGCGGGGGCGCAATTT TATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACACGGTGGCCGGCTGCGCAAGGCGGCGATTGAGTACGGGATTGCCGAGGCCGATTGGCTCGACCTCTCCAGTGGTCTGGCGCCCTGGCCCTGGCCGGTC CCCGAGATCCCTCTGCGGGCCTGGGCGCGCTTGCCGGAAGCCGACGATGGCCTGGAACAGGCTGCGAGCGAGTATTACGGCGCTGCGCACCTATTGCCGG TGCCGGGTTCCCAGGCTGCGATCCAATTGCTGCCGCGCCTGCGCCGGACCGGTAAGGTCGGCGTGCTGTCGCCCTGCTATGCCGAGCACGCCGAAGCTTG GCGCCGTGCCGGCTACGTGGTGCGCGAAGTGCAGGAGCAGGAGGTCGACTTCTTTCTCGACAGCCTCGATGTGCTGGTCGTGGTCAACCCGAATAATCCC ACTGGCCTGAGCCTGCCCCCGCAACGCCTGCTCGACTGGCACGCGCGGCTCGCCCAGCGCGGCGGCTGGCTGGTGGTGGACGAAGCGTTTATGGACGTCA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSVALLCVAAVALDALLGEPRRWHPLVAFGNFAGRIEQRFNSGGRGWRSHGVTAWVIAVVPLTLLATALSWAPYIGWVLEILALYCALGMRSLGEHVIPV AQALRSDDLDEARKRVSYLVSRQTSELDHTEVARAATESVLENGSDAVFAALFWFVVAGVPGVVLYRLSNTLDAMWGYRNERFERFGWAAAKIDDVLNYI PARLVALTYAVLGKTRLALKCWRTQGPTWDSPNAGPVMAAGAGALGVELGGAAIYHGEVHQRPQLGEGPAADADSIDRGWQLVQRGVWLWLLILCAGAQF YA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site