Strain | Pseudomonas sp. KG01 sole5_c2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCCTTCTACGGCATGTCGACCTTCGAAGGGCCGATGATGGCGATCAAGACCGTCAACTCGCTGTCCCACTACACCGACTGGACCATCGGCCACGTAC ACGCCGGCGCCCTCGGCTGGGTAGCGATGATCTCCATCGGCGCGCTGTACCACATGATCCCCAAACTGTTCGGCCGTGCACAGATGCACAGCGTCGGGCT GATCAACACGCACTTCTGGCTTGCGACCATCGGTACCGTGCTCTACATCGCCTCGATGTGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGTGCGATC AACGATGACGGCACCCTCACCTACTCCTTCGTCGAAGCGCTGCAAGCCAGTCACCCTGGTTTCATCGTCCGCGCCATCGGTGGTGCATTCTTTGCCAGCG GCATGCTGTTCATGGCCTACAACGTGTGGCGCACCGTGCGTGCCTCCGACCCTGCGCAAGCTGAAGCCGCCGCCAAGATCGCCGTTGTGGGAGCCCACTG
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DNA Sequence for Gene |
>ACR52_RS03750
ATGAAGCATGAAGTAGTCGAGAAGAATATCGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGTATCGGCGGCCTGACCCAGATCGTTCCGCTGTTCT TCCAGGACGTAACCAACAAGCCGGTGGAAGGTATGAAGCCGCGCACCGCCCTTGAACTGGAAGGCCGCGATATCTACATCGCCAACGGTTGTGTCGGCTG CCACTCGCAGATGATCCGCCCGTTCCGCGCCGAAACGGAACGCTACGGCCACTACTCGGTCGCCGGTGAAAGTGTGTGGGACCACCCGTTCCTGTGGGGT TCCAAACGTACCGGCCCGGACCTGGCCCGTGTTGGCGGGCGTTATTCCGATGACTGGCAGCGTGCGCACTTGTACAACCCGCGCAACGTAGTGCCTGAGT CGAAAATGCCGGCCTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAGGACACCGCGAAGAAGATGGAAGTCTTGCGCACCCTGGGCGTGCCCTACAC CGACGAAGACATCGCCGGTGCAGCCGCAGCCGTGAAGGGCAAGACCGAAATGGACGCACTGGTGGCCTACCTGCAGGGCCTTGGCACCATCATCAAAAGC AAACGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCTTCATGGATATCGGGATGATTCGAGGCCTGGGCACCGTTGTGGTGATGGTGGCCTTTATCGGCCTGGCGTTGTGGGTGTTCAGCCCCCGGCGCAAGTC GGAGTTTGACGACGCGACCATGCTGCCCTTTGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCGTCTAGGAGTAACAAAGAATGACTACGTTCT GGAGTCTGTACGTCACAGTCCTCAGTCTGGGTACCATTTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGCAAGGGCCAGCGCGCCGAGCAAACGGACGA GACTGTCGGCCACTCGTTCGACGGTATCGAGGAATACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGGCACCATCATCTTCGCCCTCGGT TACTTGGTGCTTTACCCTGGCCTGGGCAACTGGAAAGGCCTGCTGCCGGGCTACAACTACCTCGACAACGACAAGCAAACCGCCTTCGCCAACGGCCAGA
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Amino Acid Sequence |
>peptidase S41
MKHEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDIYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWQRAHLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAAAAVKGKTEMDALVAYLQGLGTIIKS KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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