Pseudomonas sp. KG01, ACR52_RS03540
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTCCAGGACCTGCTGCGCCGAGCCAAAATCATAGGTCCCGGTGATACGTTGGCGGGCTGCCGCCCGACTGACAACGATGGGCAAGCCGAAGGGCAC CGACAACGCGGTAAAAAACGTGTGAAGGCTTTCATCCTGCGCCTGGTAGGCCTCACCCCAGGCAGACGCGCAACCCAACATCAGCACGGCGCACAGCAGC CACCGGCAAAGCCAGTGAACAGTCGGGATTGTGGAGGATTCGGCGTACACCGGTAGGGTTTCCTGGGCGGTCTGGCGTAAAGAAGCGGCCATACTGAAAG CCTGCGGAGTTTCAATCTTGATGGAAAGTTGACGGCGTACTGCGCCTGTCGGCCCGTGGCATGTGCCTTGCTACGCACTCTGTAACAGAGCGCGTGCCAA CGACGGTGCGGGCCTACAGACAAAGGCGTCGTTACCTGCAATGGCTTACATCGCCATCTGAGGGAACGACGCTTTTTTTTGAACGAAAAGGTAAGAACTG
|
|
| DNA Sequence for Gene |
>ACR52_RS03540
ATGAACGATTCGGTCGGCAACAGCCCGATAAAAGACCCGCTGGCCTGGGTCAACGGCAGTGACGCCCCGGAAAAGAGCAGCCTCGACCTCGGCTTCATGG CCCTGAGCGATTGCGCCTCATTGGTGGTTGCGGCCACCCAGGGTTTCGCCCAACCCTACGGGCTGACGCTGAACCTCAAGCGCCAATCGTCATGGGCCAA CCTGCGCGACAAACTGGTGAGCGGTGAACTGGATGCCGCCCATAGCCTGTATGGGCTGATCTACGCCGTGCACCTGGGTATTGGCGGTGTGGCGCCTACC GACATGGCGGTACTGATGGGCCTGAACCAGAACGGCCAGAGCATCAACCTGTCACACGGCTTGCAACAGCAAGAGGTGGTCACTCCTGAGGCATTGGATC GTCACGTGCACCAAAGCCGAACAAAACTGACCTTCGCCCAGACGTTTCCTACGGGGACCCACGCGATGTGGCTGTATTACTGGCTGGCCAGCCAGGGCAT CCATCCTTTGGAGGATGTGAACAGTGTGGTGGTACCCCCACCGCAGATGGTGGCGCACTTGCAAGCCGGGCGTATCGACGGTTTCTGTGTCGGCGAACCC TGGTCCGCCAGCGCGGTGAAGCAAAACCAGGGCTTCACCCTGGCGACCACACAGGCGATCTGGCCGAATCATCCGGAAAAGGTTCTCGGCTGCACCCAGG CCTTTGTCGACCAGTACCCCAACACCGCTCGCGTGCTGGTGATGGCAATCCTCGAAGCCAGTCGCTTTATTGAAGAAAGCACCGCAAACCGCCGCTCCAC CGCACAGTTGCTCAGTGCGCGCGAATACCTCGATGCCCCGCTCGACTGCATCGAACCGCGTCTGCTCGGCCACTATGAAGACGGCCTCGGCAACCAGTGG CAAGATCCCCATGCGCTGCGCTTTTTTGCCGATGGCGAGGTGAACCTGCCCTACCTCTCCGACGGCATGTGGTTCATGACCCAATTCCGACGCTGGGGCC TGCTGCGCGATGATCCAGACTACCTGGGCGTTGCTCGCCAGGTGCAGCAACTGACGCTCTATCGCCAGGCCGCCGATGCATTGGGCATCGCAGCCAGAGA GCAAGACATGCGCACTAGCCAGTTGATCGACGGCAAAGTCTGGGACGGCGCCGACCCCGCCGGCTACGCCCGCAGCTTCCGCCTCCATGCCATGGCGGAT CACGCCGACCGCCAAGCCCTGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAGGAGGACTGATATGTTGCGAATCCTGTTGATCAACGACACACCGCGCAAGGTCGGTCGTCTCAAGACGGCACTGATCGAGGCTGGGTTCGAGGTGATT GATGAGTCCGGCCTGACCATAGACCTGCCCGCGCGCGTCGAAACAGTGCGCCCGGACGTGATCCTGATCGATACCGAGTCACCCGGCCGCGATGTGATGG AACAAGTGGTGCTGGTCAGCCGCGACCAGCCGCGGCCGATCGTGATGTTTACCGACGAGCACGACCCGAACGTGATGCGTCAGGCGATCAAGTCCGGCGT CAGCGCCTACATAGTCGAAGGCATCCAGGCCCAGCGCCTGCAACCGATCCTCGACGTGGCCATGGCCCGTTTCGAAAGCGACCAGGCCCTGCGCGCCCAG CTGCACGCCCGCGACCAGCAGCTGGCGGAACGCAAGCGCATCGAGCTGGCCAAGGGCATGCTGATGAAAATGAAGGACTGCAATGAAGAAGAGGCCTACA
|
|
| Amino Acid Sequence |
>nitrate transporter
MNDSVGNSPIKDPLAWVNGSDAPEKSSLDLGFMALSDCASLVVAATQGFAQPYGLTLNLKRQSSWANLRDKLVSGELDAAHSLYGLIYAVHLGIGGVAPT DMAVLMGLNQNGQSINLSHGLQQQEVVTPEALDRHVHQSRTKLTFAQTFPTGTHAMWLYYWLASQGIHPLEDVNSVVVPPPQMVAHLQAGRIDGFCVGEP WSASAVKQNQGFTLATTQAIWPNHPEKVLGCTQAFVDQYPNTARVLVMAILEASRFIEESTANRRSTAQLLSAREYLDAPLDCIEPRLLGHYEDGLGNQW QDPHALRFFADGEVNLPYLSDGMWFMTQFRRWGLLRDDPDYLGVARQVQQLTLYRQAADALGIAAREQDMRTSQLIDGKVWDGADPAGYARSFRLHAMAD HADRQALR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|