Pseudomonas sp. KG01, ACR52_RS16955
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGGAGAGCAGGGCGAAGATTTCCACGGCACGGGCCGACGGCTCCATGCTGCGTCCGGTGCGCACGAACAGCGGGTCATCGAACAGCCCGCGCAGGCGC GACAATGCCGCGCTGATGGCCGGCTGGCCGAGGAACAATTTCTCGGCGGCGCGGGTCACACTGCGCTCATGCATCAAGGTTTCGAATACGATCAAGAGGT TAAGGTCGACACGACGCAGGTCGTTACGGTTCATCTTGTGTCCTGGAAGAGTCAGCAAACTTGACGATAGCGGCCATCTAGAGCCCTTGGGATCCATTCA GAAGCATGACCGGCATGAATCTTACGGGGAAAGGCTGGTACTCTGCACCGGCTAATTGAGTTTTCCTACGATAGTTGAGGTCTATTCCTCAGTCGCGGAA TCAATGACAGGCATGTCGACTATTAATAGCGACCGATGGTCTTACCTGGAAAGCCCAGATAGAGTTCATGGCATTAGAAGTTACTTTGACGAGGTTTGCG
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| DNA Sequence for Gene |
>ACR52_RS16955
ATGTCCCGCACGATCCGTTTTCACAAGTTTGGTCCGGCCGAGGTGCTCAAATGCGAAGAGCATGCGGCCGCGCAGCCCGCACCGGGCGAAGTGCAGGTGC GTGTCGAAGCGATTGGCATCAGTTGGTATGACATTTTGTGGCGCCAGAACCTTGCGTCCTCCCATGCACGTCTACCGTCCGGCCTTGGCCATGAGATGGC CGGGGTGGTTGTCGCCCTCGGCGACGGCGTGGATGATTTGGCAGTGGGCGATAAAGTGGCCAGTTTTCCGGCCGAGAGCCCCAATGATTATCCGGTGTAT GGCGAGCAGATCGTCTTGCCCCGTTCGGCCCTGACTCGCTATCCCGACGTCTTGAGCCCCATCGAAGCCAGCGTGCATTACACGCCGCTGTTGATTGCCT ACTTTGCGTACATGGACCTGGCACGGGTCAAACCCGGTCAATTTGCCCTGGTCACCGACGCCAGCCACTGTGCCGGCCCTTCGTTCGTGCAGTTGGGCAA AGCCCTGGGTGTGCGGGTGATTGCCGCGACCAAGGACAGCGCAGAGCGTGAATACCTGCTGTCCCTCGGCGCAGAAAAGGTCATTGTCACCGAAGAACAG GACCTGCTGATGCAGATCAACAAGTTCACTGACAACCGCGGCGTCGACGTGGTATTCGATGGCTTGGGTGGCCCGCAGATGTCGTTGCTCGGTGATGTAT TGGCACCGCGTGGCAGCCTGGTGCTGTATGGCCTGCAAGGTGGCAACCAGACGCCATTCCCGGCGTGTGCCGCGTTCCAGAAGAACATCCAGTTCTTTGT GCACTGCATCGGTAACTTCACCGGCAAACCTGAGCTGGGCATCATTCAGGACCAGGTGGCCTTGCAGCGTGCGTTGCGTGACATCAACCAACTGACGGCC GACCGTGTGCTGGTACCGCTGAAAACCACGGTGTTTCCGTTCAGCCAGTTCGTCGAAGCGCACCGCTACATGGACGAATGCCCGTGCCGCGAGCGTGTTG CGCTGCAGGTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGTTTGAGCTGTAGGAGTATTCGCAAATGAGTACTCCAGCGTCTGAGCGAATGGGGCAAATGCGCCATTTGTCATGGCTTAACCCGCGCCAGGGTTGA GCCACCGCTTGGGCCCTTTGCCCCGCAAAATAGACCTTTCTCCCGGACGCCGCCCTGATTTCCAGTGCGGCGTCTTTGCGTGGGTGTGAACAATCACTGC CCCATCCGCCATCTGAACTGTTTTGTCGAACTTTTCTGTATCTGTTAATCATTATTCCAGTGCCGATAATTGTGCCTTCACCGTCATCTCAGGGATTGAG CAATGATTAAAGATCTGAAATTTTCATTTGATACACATGGCACTCAACTATCGCGACGCAAGCCGCTCGGAGAGACGAAGGATATTGCGCGAGGTGGTTC AAGTTCATTTGCATACAACTTCTTGAGTTGTATGAATTCCATGTGTCGGATACTTCTTTAATTTCCTGGTTAAATCGCTGTAGGACGCTGTAGGAATATT
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| Amino Acid Sequence |
>alcohol dehydrogenase
MSRTIRFHKFGPAEVLKCEEHAAAQPAPGEVQVRVEAIGISWYDILWRQNLASSHARLPSGLGHEMAGVVVALGDGVDDLAVGDKVASFPAESPNDYPVY GEQIVLPRSALTRYPDVLSPIEASVHYTPLLIAYFAYMDLARVKPGQFALVTDASHCAGPSFVQLGKALGVRVIAATKDSAEREYLLSLGAEKVIVTEEQ DLLMQINKFTDNRGVDVVFDGLGGPQMSLLGDVLAPRGSLVLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIIQDQVALQRALRDINQLTA DRVLVPLKTTVFPFSQFVEAHRYMDECPCRERVALQV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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