Pseudomonas sp. KG01, ACR52_RS15415
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. KG01 sole5_c17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGACCACACGGCTATTGTTTGAATCCAGGCGCAATGGCACCCTGCCGGAGTTCACCCCCTCCGAGGTGCTGGGCCACATTAACCGGGGCTTGATCAGCT GCAAGCTGGGCAAGCACGTAACGATGGTCGGCGGCGTGATAGACGAAGAAACCGGTCTTTTGACCTACAGCATTGGCGGTCACCTGCCGATGCCGGTTTT GTACACTCCTGACAGTGTGCGCTACCTGGAAGGACGTGGTCTGCCCGTAGGCTTGTTCAATGAAGCCACCTACGAAGACCACATCCTGGAACTGCCGCCG ACTTTCAGCCTCACGCTGATGTCCGACGGTATCCTGGACCTTCTTCCAGAGCCTACACTCAAAGAGAAAGAAGCCGCCTTGCCCCAACGGGTCAAGGCAG CGGGCGGCAGCCTGGATGGTCTGCGGCAGGTTTTTGGATTGGCCACGCTAGGGGAGATGCCGGATGATATCGCCCTATTGGTGTTGAGCAGGAATCTTTG
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| DNA Sequence for Gene |
>ACR52_RS15415
ATGAGTACCGGAAGAATCCAATTCGCCGAGCAAGACGGGACCTTCGTCCTGAAGTTTGTCGGTGAAGTGCGCCTGACCTTGTGTTCGGCCCTGGATGCGA CGATTGAGCGGATTTTCACAGCGTTGAATTTCTCGGCGATCGTGATCGATCTGACAGAAACCCGCAGCATCGATAGCACCACCCTTGGGCTGTTGGCCAA ATTGTCCATTCTGTCTCGGCAGAAGGTCGGCCTGTTGCCCACCGTCGTCACCACCCACGAAGACATCACCCGGCTGCTGCAGTCCATGGGCTTCGATCAA GTGTTCAACATCGTTGACCGCCCGATCCCGCGCCCGGAATGCCTCACCGACCTGCCGTCCCAGGACCAGTCCGAGGAAGTCGTGCGGATCAAGGTGCTGG AAGCGCACAAAATCCTGATGGGGCTCAACGAGTCCAATCGCGAAGCCTTCCACGACCTCGTGAATGCTCTAGAGCGTCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATCATTTGAAATACGGTCCAAATGTGGGAGGGGGCTTGCTCCCGATTGCGCCAGACCCGTCAGCGCATTTCTAACTGTGTCTAGTCCTGAAATAGGTT TACACCCATTTCAGCCTCAAAACGCCCGATGCACCGCATCGGGCGTTTTGTATTTCAGCGATAGATGTGGCCGCTCGCTGTTATATATCTGCACCGATTG ATCCACCATTCGCGCGGCTTCAGCCGCATCTTTGGGCCGGTGCAAGAGAAACT
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| Amino Acid Sequence |
>anti-anti-sigma factor
MSTGRIQFAEQDGTFVLKFVGEVRLTLCSALDATIERIFTALNFSAIVIDLTETRSIDSTTLGLLAKLSILSRQKVGLLPTVVTTHEDITRLLQSMGFDQ VFNIVDRPIPRPECLTDLPSQDQSEEVVRIKVLEAHKILMGLNESNREAFHDLVNALERH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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