Strain | Pseudomonas sp. KG01 sole5_c16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCATCACCGACATCCTGCAAGAGCTGGAAAAACCTGGCCGCGACCCACGCCCCGGGTTCAAGACCGCCGAGTTCCAGGACGGCGTCGAAGACCTCAAGG ATCTGCAACTGGGCATGATCCTCGAAGGCGTGGTCACCAACGTGACCAACTTCGGTGCCTTTGTGGATATCGGCGTGCATCAGGACGGTTTGGTGCACAT CTCTGCGCTTTCGGAGAAGTTCATCAAGGACCCGCGCGAAGCGGTGAAAGCCGGTGACGTGGTCAAGGTCAAGGTCATGGAAGTCGACATCCCGCGCAAA CGCGTCGGCCTGTCGATGCGCATGAGCGACACCCCTGGCGAGAAAATCGACGGTGCCCGTGGCGCACGCCCAGGCTCGGCCCCGCGCCAGTCCCAAGGCC GCTCTGACAACGCGCCGCGCAAGGAAACTGCGACCGCAGCGCCGACCAATAACGCCATGGCCTCGCTGTTTGCCAACGCCAAACAGTTGAAGAAACGCTG
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DNA Sequence for Gene |
>ACR52_RS14695
ATGGAAATCCCGGCCGGCTTGACCCAGAGCGCGTTCAGCGAACTGATCGGCTGCCGCCTGCAACGCCTGGACCAGGGCGTTGCCGACGTGGCCCTGACCC TGGAGCCGAAGCTGCGCAACCGCGCGGGCAAGCTCCACGGCGGGGCGATTTTCAGCCTGGTGGACATCACCATGGGGCTGGCCTGCTCCAGCGCCCATGG TTTTGACCAGCAGAGCGCGACCATCGAGTGCAAGATCAACTACATCCGCGCAGTGGACGACGGTGATGTGCTGTGCACCAGCCGGGTAGTCCACGCCGGT CGGCGCACCTTGGTGGTCGAGGCGGATGTGTATCAGGACGAAAAACTTGTCGCAAAAGCGCAGGGCACCTTCGCTGTCCTATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTCCCCACCCTCGATTTGAGTTAATTTCGGCGCTGCGATAACGGCGTCGGAATTTTCTTGCTGCGCTATAGCCCAATTCATGGAGTGAAGTCGGCTTTTT CAGAGCGGGTCAAATCGACTCAAAACCAGGCGATAACGCCAGTTTTAACTTCACCCTTGTAGACCGTCCTGCCCACCCCCATATTGGGGCGACTGACGCG TGAAGGAATCCAACTTGAGCGAACTTCTCAACCGCCGCCTGGCCCTGCTCGGCAAGCGCGAACACCTCTCCCTGCTAGAGCAGTGCTTGCACGGCATCGA GCGCGAATGCCTGCGTGTCACCGGTGAAGGTCGCCTGGCACAAACGCCGCACCCCGAAGCCCTGGGCGCCGCGCTGACCCACGAACAGATCACCACCGAC TACTCGGAATCGTTGTTGGAGTTCATCACTCCGGCCCTGCCCAACCCGGCCGATACCCTGAGCAGCCTGGACAAGATCCATCGGTTTGCCTACACCAAGC
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Amino Acid Sequence |
>hypothetical protein
MEIPAGLTQSAFSELIGCRLQRLDQGVADVALTLEPKLRNRAGKLHGGAIFSLVDITMGLACSSAHGFDQQSATIECKINYIRAVDDGDVLCTSRVVHAG RRTLVVEADVYQDEKLVAKAQGTFAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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