Pseudomonas sp. KG01, ACR52_RS01385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. KG01 sole5_c1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCATCCGCAGTTCGGATTACCTGTCGTTCTGCTATGAGCAACTGCTGACCCATCAGGGCGCGCTGTGCATCTTCGGCCATGGCCTGGGGCCGCAGGACAA TCACCTGGTGGACGCGATTCGCCAGGCCAAACCGAGCACCCTGGCGATCTCGGTGTCGGGGCGCAGCGACGGGTTTATCCGCCAGCAGAAGCGCCGGTAT TCGGAGTTGTTTGAAGGCACTGGGGTAGAGTTGCGGTTCTTCGCTGCCCGCACCCATGCACTGGGCAATTCGGCATTGTCGGTGCCGGTCGAACGCTGAC TTCCTGAACACAGCTCCCACACTGACTAATGCCAGTCAGTTAAGGGGGCGCACTGGACTTGTGGCGAGGGCGCTTGTCGGATCGTTGCACCGCCCCTCCC ACACGTTGACCGAGTACGCGCTTTACATAGAGACAAATGGCAATAATTCTCGATATCATTCACGACTTTTCCACGTCGTGCTTCGTCAAGAAGGATATCC
DNA Sequence for Gene
>ACR52_RS01385
ATGTCTCGTCCCAAGCCCGACCCGTTGTCGGCCGATGCCTTTCGCGGGTTCTATGCAGATATTCTGTATTTCCTGCGCAAACGCACGGACAACGCCAGCG ACGCGGCAGACATGACTCAGGATGTCTTTACCCAATGGCTGGACTACCGCGACCGGGCGAAGGTCGAGCAGCCACGGGCGTTTCTGTTCCAGATGGCGCG CAATCTGCTGCGCGACCACTGGCGCAAACAGAAGGTACGGCAGAACGTCCACGCTGATCAGGCCGACATGGACGCCGAGCCGGTCACTAATGAGCAAAAC GACCCCATGGCCGCAGCGCTTCGCATGCAACGCCTGGAACAGTTGAAAGAAGTCCTCGCCGAACTCTCGCCCCGCAGGCGAGAAGCCCTTATGCTGCACC GCTTCGAAGGCTTGAGCCAGGCGCAGATCGCCGAGCGCATGGGCATTTCTACCAGCATGGTGGAAAAGCACATCGCTTTTGCCCTGCTGCATTGCAAGCG ACGCCTTCAACCCGACCCCGGCACGGAGCAGCCAGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGCCTGAGCGACATCGACGCCCTGGACATCGAAGCGAGCGACTCCATCGATGCCCAAGCCGCCAGCTGGTTTGCACGCAACCGCAACGACGCGACCCG TGCCGACCGCAAGGCCTTCGCCGCCTGGCAGGCCGAGCCCGCCCATGCCCGCGCCTATGCCGAATTCGAACAGCTGTGGGCCGACCTGGCCCAGTTGCAG CAACTGAACAAACCCGTGCCGTTGCCCCAGCGCAGACCCGCGATCTGGCGCCCCGCCCTGGCCGTGGCCGCCGCCTTGCTCTGCGCGGTGCTGGCGACGC ATATCGGCGCGCCCCGCGAGCTGTATCACACGCAGGTCGCGGCCCATGCCAAAGGCATGCGCACGCTCAACCTGCCCGATGGCAGCACCGTTTATGTGAA TGCCAACACCCGGCTGCGTGTGGACTTCACCGCGCACCAACGCATCATCCATCTGGACAAGGGCCAGCTGTACATCGAAGTGGCCGCCGACAAGGAACGG
Amino Acid Sequence
>RNA polymerase sigma factor
MSRPKPDPLSADAFRGFYADILYFLRKRTDNASDAADMTQDVFTQWLDYRDRAKVEQPRAFLFQMARNLLRDHWRKQKVRQNVHADQADMDAEPVTNEQN DPMAAALRMQRLEQLKEVLAELSPRRREALMLHRFEGLSQAQIAERMGISTSMVEKHIAFALLHCKRRLQPDPGTEQPE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site