Pseudomonas sp. HMP271, DP64_RS11590

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCTGGTGGTGTTCCTCTGCCTGGCGGCACTGTATGAAAGCTGGTCGATTCCGTTCGCCGTGATGCTGGTCGTGCCGCTCGGTGTCATCGGCGCACTGC TGGCGACGATGGGGCGAGGCCTGAGCAACGACGTGTTCTTCCAGGTCGGTCTGCTGACGACGATTGGCCTGACCGCGAAAAACGCGATCTTGATCGTCGA GTTCGCGAAGGATCTGCATGGCGAAGGCAAGAGCCTGTTCGATGCCGCCGTCGAGGCCTGCCGGATGCGCCTGCGGCCGATCATCATGACCTCGCTGGCG TTCACCCTCGGCGTGGTGCCGCTGGCGCTGGCCAGCGGCGCCGGAGCAGGCAGCTCGCATGCCATCGGCACCGGCGTGATCGGCGGCATGGTCACGGCGA CCCTGCTGGTGATTTTCTGGGTGCCGCTATTCTTCGTTCTGGTGACCTCGCTCGCCGGCGGCCGCAAGGCTGCAGCCGCGAACGAGAAGGGAGAGGTGCA
DNA Sequence for Gene
>DP64_RS11590
ATGAACAGGTCGTTGTTGAGCATCGCGTTGCTCGCCGCATTGAGCGGCTGTTCGTTGATTCCCGACTACCAGCGGCCGGAAGCCCCGGTGGCTGCCAACT GGCCGCAGGGCGAGGCCTACGCGGCCGGCGGTGAGCAGGCAGCCGCCGTGCCGGGCTGGCGCGAATTCTTCCGCGATCCGGCGCTGCAGCAATTGATCGA AGTGGCGCTGGAGAACAACCGCGACCTGCGGGTGGCGGCGCTGAACGTCGATGCCTATCGCGCGCTGTATCGCGTCCAGCGCGCCGATCTGTTGCCGGCC GTCACGGCCGATGGCGGCGGCACGCGCACCCGCACCCCGGGCGATCTGAGCATGAGCGGCGAGCCGACGATCAGCAGCCAGTACAGCGCGACCCTCGGCG TGTCCTGGGAGCTGGATCTGTTCGGCAGGCTGCGCAGCCTGCGCGATCAGGCGCTGGAGGAGTATTTCGCCAGCGAGGCCGCCCAGCGCAGCACGCAGAT CAGCCTGATCGCCAGCGTCGCCAATGCCTGGCTGACGTTGCAGGCCGACCAGGCGCTGCTGGAGGTCACGCGAGACACGCTCAAGGCCTACGAGGAAAGC TTCGGCTTGACCCAGCGCAGCTTCGATGTCGGCGTGGCCTCGGCGCTGGAACTGCGCCAGGCGCGCAGCGCGGTGGAAAGCGCGCGGGTGAGCATCGAAC GGTACACCCGCCAGGTGGCGCAGGACCGCAATGCGCTGACGCTGCTGCTCGGCCAGGGCATGCCAGCGAATCTGCAGGTCTCCGGCGAACTGGCGCGCGA ACAGCTGGCCGAGTTGCCGGTCGGCTTGCCGTCGGACCTGTTGCAGCAGCGCCCGGACATCCTTCAGGCCGAACACCAGCTCAAGGCGGTGAATGCCAGC ATCGGTGCGGCGCGCGCGGCGTTCTTCCCGCGCATCAGCCTGACCGGCGCGGCCGGTACGGCCAGCCGCGAGCTGTCCGGTCTGTTCGACGGCGGTTCCG GGTATTGGACATTCACGCCGAGCATCAGCGTGCCGATCTTCAATGCCGGCCAGCTGCGCGCCAATCTCGACTACGCCACGATCAGTCGTAACATCCAGGT CGCCGAGTACGAGAAGGCGATCCAGACCGCCTTCCGCGAGGTAGCCGACGGTCTTGCGGCGCAGGCCACCTACACGCGCCAGGTCCAGGCGCAGCGTGAT CTGCTGCAGACCAGCGAGGACTACTACAACCTCGCCGAACGGCGCTACCGCACCGGCGTGGACAGTTACCTGACTCTGCTCGATGCGCAGCGCCAGTTGT TCAGCGCTCAGCAACAGCTGATCGGCGACCGTCTGGCGCAGCTGGTCAGCGAGGTCAACCTGTTCAAGGCGCTGGGTGGCGGCTGGCAGGAGGCGGTGCG GGTGCAGCCGGCAGAGGGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGATGCGGTGGTCGGTTGGAACACGACCAGCGCCGATAACACGCAGATATGAGAACGCCGCCCATGGGGCGGCGTTCTCGTCTGTGGCTCAGGCTTCG CGGTTGCGCGTCAGCAGGGCCGGCTTCTCGCCTCGTGGCCGGGTTGGCAGCTGCTCGAGCTGATCCAGGCTGGGCAGGCGATCGATCTTCGATTCCTTGT GGATGATCACCGGCTGCTTTTCACGCGGCTTGGCGGCTTCCTGACGCACGACAGCCGGCTCTTCAATCCGGCGGCCCTCGTTCTTGCGCCGTTGCTGGCC GTTGCGCGGCTGACCGCTGCGCGCCGTCTGGCCTTGACCCGCACCCGGGCGCTTGCCCTTGCCGGAGGGAGCGCCAGGCGCGCCCGAACGTGCGGCACCG GCGGCACGTGGCGCGCTACCAGGCTGAGCCGGGGCGCCAGGACGGCGGCCGCGGTTCTGCTTGTTCTGGTAGGGGCTGACGTAATCGACACGATTGCCGA
Amino Acid Sequence
>adeC/adeK/oprM family multidrug efflux complex outer membrane factor
MNRSLLSIALLAALSGCSLIPDYQRPEAPVAANWPQGEAYAAGGEQAAAVPGWREFFRDPALQQLIEVALENNRDLRVAALNVDAYRALYRVQRADLLPA VTADGGGTRTRTPGDLSMSGEPTISSQYSATLGVSWELDLFGRLRSLRDQALEEYFASEAAQRSTQISLIASVANAWLTLQADQALLEVTRDTLKAYEES FGLTQRSFDVGVASALELRQARSAVESARVSIERYTRQVAQDRNALTLLLGQGMPANLQVSGELAREQLAELPVGLPSDLLQQRPDILQAEHQLKAVNAS IGAARAAFFPRISLTGAAGTASRELSGLFDGGSGYWTFTPSISVPIFNAGQLRANLDYATISRNIQVAEYEKAIQTAFREVADGLAAQATYTRQVQAQRD LLQTSEDYYNLAERRYRTGVDSYLTLLDAQRQLFSAQQQLIGDRLAQLVSEVNLFKALGGGWQEAVRVQPAEG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site