Pseudomonas sp. HMP271, DP64_RS11545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.160
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 250 270 -
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 812 872 9.6E-21
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 243 347 1.49879E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 722 735 1.7E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 242 346 4.3E-5
MobiDBLite mobidb-lite consensus disorder prediction - - 1 40 -
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 413 552 4.1E-10
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 601 737 6.8E-16
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 239 370 1.8E-24
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 905 1018 5.4E-34
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 243 351 2.75E-20
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 244 342 7.2E-13
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 907 1018 7.2E-27
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 551 737 5.0E-54
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 95 194 9.9E-15
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 93 215 7.07E-26
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 642 656 1.7E-11
SMART SM00260 chew_2 IPR002545 CheW-like domain 730 874 3.3E-33
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 743 875 2.4E-24
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 907 1018 4.53888E-30
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 904 1022 7.54E-36
CDD cd16916 HATPase_CheA-like - - 560 735 2.07825E-81
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 93 191 2.25045E-14
Coils Coil Coil - - 451 471 -
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 554 735 2.23E-37
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 698 716 1.7E-11
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 737 871 8.5E-25
Gene3D G3DSA:3.40.50.2300 - - - 907 1025 2.4E-39
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 92 226 9.6E-28
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 553 737 2.6E-62
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 96 1022 0.0
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 597 738 1.1E-22
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 93 190 2.1E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.