Pseudomonas sp. HMP271, DP64_RS11340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGATCCGGAGTAACCCGTGCGGATCAAGCTGATCGCCGTCGGCTCGAAGATGCCGCGCTGGGTGGAGGAGGGCTGGCAGGAATATGCCCGCCGCCTGCC ATCCGAGCTGCCGCTCGATCTGGTGGAGATTGCGCTCAACACCCGTGGCAAGAACGCCGATGTGGCGCGCCTGATCCGCCAGGAAGGCGAGGCGATGCTG GCCAGGGTGCAGCCGGGCGAGCGCATCGTCACGCTGGAGGTACACGGCAAGCCGTGGAGCACCGAGCAACTGGCGGCAGAGCTGGAGCGCTGGCGGCTGG ATGCGCGCAACGTCAACCTCATGGTCGGCGGCCCGGAAGGGCTGGCGCCGGAGGTCTGCGCGCGCAGCGAGCAGCGCTGGTCGCTGTCACCGCTGACGCT GCCGCATCCGCTGGTGCGGATTCTGGTGGGTGAGCAGATCTATCGTGCCTGGACGCTGCTGTCCGGCCACCCCTATCACAAGTAGTCCGACGACCGATCC
DNA Sequence for Gene
>DP64_RS11340
ATGCCGCAACCGATCCCCCTCAAGGACCACGAAAAGGATGCCCTGCTGGTGCGCAGTCGCGCGCTGGTCGGCATTGTCGTGGTGGTGCTGCTGATCGGTG TGCTGGTGGCGCGCATGTACTACCTGCAGGTAGTGCAGTTCGAGCACCATTCGACGCTGTCGGAAAACAACCGTGTGCACGTGCAGCCGATCCCGCCCAA CCGCGGGCTGATCTTCGATCGCAACGGCCGGGTGATCGCCGACAACCGCCCGAGTTTCAGTCTGACGGTCACCCGCGAGCGCGCCGGGCAGGACTGGCGC GGCGTGCTTGACCGGGTCGTCGAGGTGCTGGAGCTGCCGGCCGAGGAGCGCGAGCTGTTCGAGAAGCGCGTATTGCAGGGGCGCCGGCCGTTCGAACCGG TGCCGATCTTGTACGAGCTGTCGGAAGAGCAGATCGCGCGCATTGCGGTGAATCAGTTCCGTCTGCCCGGTATCGAGGTGTCGGCGCAGCTGGTACGGCA CTATCCGCAGGGGCCGCACTTCGCCCACTCGGTCGGTTACGTCGGGCGGATCAACGAAAAGGAGCTGCAGTCGCTCGACCCGGTGAACTACAGCGGCACC CATCACATGGGCAAGACCGGCATCGAAAAATTCTATGAGGACGTGCTGCACGGCCAGGTCGGCTACGAAGAAGTCGAGACCAACGCCCGCGGCCGCGTGC TGCGCGTGCTCAAACGCACCGACCCGATTCCCGGCAAGGACCTGACGCTGACCCTTGACCTCAAACTGCAGGAGGCCGCCGAGGCCGCGCTGGGCGGCCG GCGCGGGGCGATCGTCGCGCTGCTGCCGGATACCGGTGAGGTGGTGGCGATGGTCAGCCAGCCGAGCTTCGATCCCAACCTGTTCGTCACCGGCATCAGC TTCAAGGCGTATGGCGAGCTGCGCGACTCGATCGATCGGCCGCTGTACAACCGCGTACTGCGCGGTCTCTATCCGCCCGGCTCGACGATCAAGCCGATGA TGGCGATCGCCGGGCTGGATGCCGGGGTCATCACGCCGACCAGCCGGGTGTACGACCCGGGCTACTACCAGCTACCTAACGTGAAACACAAATACCGCAA CTGGAATCGCGGCGGCGATGGCCCAGTGGATCTGGAAGTGGCGATCATGCGTTCCAACGACACCTACTTTTACGACATGGCGCACAAGCTGGGCGTGGAT CGCATGCACGACTACATGACCCGTTTCGGCCTCGGCCAGCGCGTGGCGCTGGACATGTACGAGGAAACCGCCGGGCTGATGCCGTCGCGCGAGTGGAAGC GTGCGCGCTATCGCCAGGCCTGGTATCCCGGCGAGACGGTCATTCTCGGCATCGGCCAGGGCTACATGCAGGCCACGCCGCTGCAGCTGGCGCAGGCCAC CGCGCTGATGGCCACGCGCGGCAAATGGATTCGCCCGCACCTGGCCAAGCGCATCGGCGACCAGCCGCCGGTCGATCCGAATCCGCTGCCGGACATCGAG CTGCGCGATCCGAAGTTCTGGGACTATTCGATCCGCGGCATGGAGCAGGTGCTGCACGGTGCCCGCGGCACCGCGCGCAAGGTCGGCGACAGCGCCGCCT ATCGTATCGCCGGCAAGAGCGGCACGGCACAGGTGGTGGCGATCAAGCAGGGCGAGCGCTACGACAGCGGCAAGCTCAACGAGCGTCACCGCGACCACGC GCTGTTCGTCGCCTTCGCCCCGGTCCATGATCCGCAGATTGCCGTGGCGGTGATGGTGGAGAATGGCGAGTCGGGCTCGGGCGTCGCCGCGCCGGTGGCC AAACAGGTCATGGATGCCTGGCTGCTGGATGAGAATGGCCAGCTGAAGGCCGAGTACGCCGCGCCGACCACCACGGGCGCCAAAAAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGCAATTTCGACCGTACCCTGTCTCGCGAAGACGTCATGCGCCGCCGCGCCAGCCTGCTGCAGCGGTTGCACATCGATGCGCAGCTGCTGTTGCTGTT GCTGCTGCTGGCCGCCGGCAGTCTGTTCATCCTCTATTCGGCCAGCGGCAAGAACTGGGATTTGCTGCTCAAGCAGGCGTCATCCTTTGGCCTGGGGCTC GGCGCCATGCTGGTCATCGCCCAGCTGGAGCCGCGCTTCATGGCGCGCTGGGTGCCGCTGGGCTATCTCGCGGTGGTGGGGTTGCTGCTGGCGGTGGAGT TCATGGGGCACACCGCGATGGGCGCTACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCTTCGGAATTCATGAAGATCATCATGCCGATGAC CATCGCCTGGTACCTGGCGGCACGCCCGCTGCCGCCGCGCTTCAAGCACACCCTGGTGAGTCTGGCGCTGATCGTGGTGCCGTTCGTGCTGATCGTGAAG
Amino Acid Sequence
>penicillin-binding protein 2
MPQPIPLKDHEKDALLVRSRALVGIVVVVLLIGVLVARMYYLQVVQFEHHSTLSENNRVHVQPIPPNRGLIFDRNGRVIADNRPSFSLTVTRERAGQDWR GVLDRVVEVLELPAEERELFEKRVLQGRRPFEPVPILYELSEEQIARIAVNQFRLPGIEVSAQLVRHYPQGPHFAHSVGYVGRINEKELQSLDPVNYSGT HHMGKTGIEKFYEDVLHGQVGYEEVETNARGRVLRVLKRTDPIPGKDLTLTLDLKLQEAAEAALGGRRGAIVALLPDTGEVVAMVSQPSFDPNLFVTGIS FKAYGELRDSIDRPLYNRVLRGLYPPGSTIKPMMAIAGLDAGVITPTSRVYDPGYYQLPNVKHKYRNWNRGGDGPVDLEVAIMRSNDTYFYDMAHKLGVD RMHDYMTRFGLGQRVALDMYEETAGLMPSREWKRARYRQAWYPGETVILGIGQGYMQATPLQLAQATALMATRGKWIRPHLAKRIGDQPPVDPNPLPDIE LRDPKFWDYSIRGMEQVLHGARGTARKVGDSAAYRIAGKSGTAQVVAIKQGERYDSGKLNERHRDHALFVAFAPVHDPQIAVAVMVENGESGSGVAAPVA KQVMDAWLLDENGQLKAEYAAPTTTGAKKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site