Strain | Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCTCCACAGCGGCGTGAGCACGGCGAAGAGAAAGGCGAACAGCCGCACGCGGTCGACAATCATCATCGCGCGGCGCTGGCAGAGCAGCATGGGATGACC TACTGGCGTCAACAGGTGGCGCAGCTCGCTGCTTTTCAGCTCGCTGGGCAGCAGCGTGGTCAGACGTGAGCGAAGCAGGTCGATCAGTGCAGTCATTGTT GTTCTATCCACGGCAGGGAACACGCGTTCAGCCCCGGCCATTGCCGCACCCTGTGAAATCCCTGGGTTGCGCATGATGGCTTCCGGCCAGCAGCGCGATC CTAGCGGAGCGGGAAATTGATTCATTGAGCCAGGGCAAGAACCCGCGGGGTTTCTTGCACCTGTCGCGCCGTCCGTCTTTCGGGCGACAGCCTGTCCCGA CGAATCGCCCTTTGGTGCGCTGTCGCCGCCGGTCCGCCCTGGCTAGCTTGAACGGGCGCCCGAGCGCGCAGCAGAACAACAACAAGAAGGGAGACACCCG
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DNA Sequence for Gene |
>DP64_RS10380
ATGCATCCGACGACAAGACCGCTGGCCGCCCTGCTGCTGGCCATCCTTGCCGGCAGCGCGGCAGCCGCCGACGGCCCGTTCAGCCAGTTCATCAACTTCG GCGACTCGCTCAGCGATGCCGGCAACTTCCCCGACGTCGGCAGCCCGCTGCTGGGCGTCAATCCGACCGGCGGCTTGCGCTTCACCAACCGCACCGGTCC GACCTATGGCGACAACAACGTCGAGTACGGCGGCCAGGTCGCCACCCAGCTGCTGGCCGAGCGCCTGGGACTGACTTCGCTGCCCTCCACGCCGCTGCTG CCGCAACTGCTGACCGGCAACCCGGACGGCACCAACTACGCCGTCGGCGGCTACCGTACCGACCAGATTCTCGATTCCATCACCGGCACCTCGACGGTAG CTACCGGCAGCCTGAGCCGCTCGCGCCCCGGCTATCTGGCTGATAACCCGCAGGCCGACCCGGACGCGCTGTACTACCTCAACGGCGGCGCCAACGACAT CTTCCAGCTCTCCAGCCGGCCGATCACCATGGCCGCCGCGGCGGGCGATCTGGTGGCCGGCGTCAGTGCGCTGGCCGAAGCCGGTGCGCGTTACATCATC GTCTCCGACCTGCCCGACGTCGGCAGCACCCCGCTCGGCACCCTGACCGGCAACAGCGCCCAGCTCAATGCCCTCAGCGACCAGTACAACGCCGAGCTCG AGGCACAGCTACGCGGCTCCGGCGCCAACTACGTGCTGCTCAACAGCCGTCTGTTGCTTGAAGAGGTACGCGCGGACCTGGCGCAATTCGGCTTTGCCGC CGACGTCAACCAGAACGCCGTGTGCTTCTCCGGCGACAGCTGCCTGGCCGACCCGATCTATGGTCGCAGCGGCAGCGCCCCCGACCCGGACCGCCTGCTG TTCAACGATGCCGTGCACCCGACCACCGCGCTGCATCGCATCAGCGCCGACTACCTGTATTCGATTGTCGCGGCGCCTTGGGAGATTTCGCGCCTGCCGG AGATGGGTCAGGCGGCGCTGCGCGCGCAGCTGCAACAGCTCGATCAGGAGCTGATGGCCCAGCGTGGCCGCTGGCAGCCCGTCGGCGAATGGCGCATCCA GGCCGGCGGCGGCTATCGCAGCCCGGATTTCGACGGCTACGGCAGTGGCGACGGCGACAGCCAGTCGCTGTCGCTGAGCCTGTCCCGCCGACTGAGCGAG CAATGGCTGGCCGGCCTCAGCCTGGCGGTCGGAGAGAACGATGTCAGCCTCGGCGCTGGCGAATCCGACTACGACATGCGCAGCTACCTGGCGACCGTCT TTGCCCGTTACGAGCAGGATCGCCTGTTCGCCGATTTCACCCTCAGCGGTGGTCACCTGGACTACCACGACCTGCAACGGCGCTTCGCGCTGGGCATCAG CGAGCGCGTCGAGAAGGGCTCCACCGACGGACAGCTCTGGGCGATCGGCAGCAAAGTCGGCTTCAACCTGATGCAGCCACAGGATGCGATGCAATTCGGC CCCTTCATCGGGGCGAACTACCAGCGCGTGGAAGTGGATGGCTATAGCGAGCGCGGCGAGCGCTCCACCGCGATGACCTTTGCCGATCAGGAGCGCGACT CGCTGCGCTTGTCGCTCGGCCTGTTCGGCGACCTGGCCCTGAGCGAACGCACCCGCCTGTACGGCGAAGTGGCTCGTGAAGTGGAGCGTGAAGACGAGGA CCTGGAAGACCTGCGCATGTCGCTCAACAGCGTGCCCGGTAACAGCTTCGAGCTACCCGGCGCGGTGCCGACGGGCGATCAAACGCGCTTCAGTGTCGGC TTGGCGCATCAGTTGGCCGCTGATCTGGCGCTGCGGGCCAACTACCACTATCGCGGCAACGACAACCGCGATCACGGCCTGAATCTGTCGATCAGCTGGG ATCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGTTCGGGGCAACCCGTGCGGTTGCCCCTGCTTGACGTCAGCGCGCGTCGAGCTGGCCCTGCAGGTTGGCGATCTGGCTCTGCAATGTGGTGATGTTG CGCGTGACCTGGGCCCGGAAGGCGTCGAATTCAGCCGTGTTGGAACTCGCCGCCGGACGGTTCTCCAGTTCGCTGCGCAACACCAGCAGGTCCTGTTCGA GGCGGCTGATCGCCTGACTCGGATTGCCGCGTTGCTGCAGAGCGGCAACGTCCTTGCCCAGCGCATCGACGCGACTACGCAGCTGGTCCTGCGCACCGAG CGCCGTTTTCAGCGCAGCCTGTTCGCTGCCCAGGGTCTTGAGATCCGCGACCAGCGTCGCGCCCGTCTGTTGCTGGGCGCGCAGCTCGCCATCGAGCCCG TCGAGGCGCTTGCCCTGCTCCTGCAGGCGCTGATCCTGATTGCCCTGCTTGCCGGCCAGGCTCTGCTGCTCGGTGGCGAATGCCTGCTGCTTGCGGGTCA
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Amino Acid Sequence |
>esterase
MHPTTRPLAALLLAILAGSAAAADGPFSQFINFGDSLSDAGNFPDVGSPLLGVNPTGGLRFTNRTGPTYGDNNVEYGGQVATQLLAERLGLTSLPSTPLL PQLLTGNPDGTNYAVGGYRTDQILDSITGTSTVATGSLSRSRPGYLADNPQADPDALYYLNGGANDIFQLSSRPITMAAAAGDLVAGVSALAEAGARYII VSDLPDVGSTPLGTLTGNSAQLNALSDQYNAELEAQLRGSGANYVLLNSRLLLEEVRADLAQFGFAADVNQNAVCFSGDSCLADPIYGRSGSAPDPDRLL FNDAVHPTTALHRISADYLYSIVAAPWEISRLPEMGQAALRAQLQQLDQELMAQRGRWQPVGEWRIQAGGGYRSPDFDGYGSGDGDSQSLSLSLSRRLSE QWLAGLSLAVGENDVSLGAGESDYDMRSYLATVFARYEQDRLFADFTLSGGHLDYHDLQRRFALGISERVEKGSTDGQLWAIGSKVGFNLMQPQDAMQFG PFIGANYQRVEVDGYSERGERSTAMTFADQERDSLRLSLGLFGDLALSERTRLYGEVAREVEREDEDLEDLRMSLNSVPGNSFELPGAVPTGDQTRFSVG LAHQLAADLALRANYHYRGNDNRDHGLNLSISWDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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