Pseudomonas sp. HMP271, DP64_RS10355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCCGGCTGGGCCTGGCTGGTGAAGAAATCCGACGGCAGCCTGGGCCTGGCCAGCACCATCGGCGCCGGCAACCCCATGACCGCCGGGGACAAGCCGCT GCTGACCTGCGACGTGTGGGAGCACGCCTACTACATCGACTACCGCAACGCTCGTCCGAAGTTCGTCGAAGCGTTCTGGAACCTGGTCAACTGGGATTTC GTCGCGAAAAACTTCGCCGGCTGATCCAGCCGTTCCGGCTGTCCGTGCGCACCTGCATGCCGGACAGCCAGGCCAGTCCCCCGAAAATGCCCGCTTCGTC AGTTGCGGGCATTTTTCGTTCAAGCCCGGCAGAACCCGGCCGATGTGACGGGTAGCGCAAGCATCGCCCGGGCGTGTCGTGCACGCTGCGAGGCATGCCC GACCTTAGCGTCATAGTTCGATCACAAGGTTTTTTGACGACACCTCCATGACTATCAATACTTGCGCAACCAAGCACCGGCACGGAAAAGGGATCTTCTC
DNA Sequence for Gene
>DP64_RS10355
TTGAAGCTGGAATTGCGCAACAGCCTGTCACGAAGACTCCTGCGAGTGGTTCTGCTGTCCGCACTGGCCGTGGGGCTGGTTCTCAGCTGTGCGCAGATCA TCTTCGGAGCCTACAAGACCCGTCATCTCATCGCCGACGATGCGCAACGCATCCTGCGCATGACCCGCGATCCCTCGACGCAGGCGATCTACAGCCTCGA CCGAGAAATGGGCAGCCAGGTGATGGAAGGCCTGTTCCAGCACGAGTCCATCCGCGAAGCCTCGATCGGTCATGCCGGCGAGGAATTGCTGGCGCACAAG TCGCGCCCCCTGCTGACGCTGCCTTCACGCTGGCTGACCGATCCGATCCTCGGCCGCGACCAGCAGTTCTCCATTCCGCTGATCGGCCGCGAGCCCTACA ACGAACACTATGGCGACCTGCGCATCACCCTCGACACCGCCCGCTATGGCCAGGAGTTCATCAGCGACTCGGTGGTGATCGCCGTCATCGGTGTCCTGCG CGCACTGACCCTCGGCCTCGTATTGTTCCTCATCTACGAATGGCTGCTGACGCGCCCGCTGACCAAGCTGATCGAGCACTTGGCGCGCATCAATCCCGAC CGTCCCGGCGCGCACAAGCTGCCGCTGATCAAGGGCCACGAACGCAACGAACTGGGCCTCTGGGTCGAGACCGCCAACGGTCTGCTCGCCGCCATCGAAC ACAACATGCAGCTGCGTCAGCAGGCCGAGAACAGCCTGCAGCATATGACTCAGTACGACCCCCTGACCGGCCTGCCCAACCGCCAGCAGCTGCAGCGCCA GCTCGATCACATCCTCGAGGAAGCGCGTCGCCTGCAACGACGCGTCGCGGTGCTCTGCCTCGGGCTGGACGATTTCAAGGGCATCAACGAGCAGTTCAGC TATCGCACCGGTGACCGCCTGCTACTGGCGCTGGCCGACCGCCTGCGCTCGCTGGGCGGACGGCTGGACGCCCTGGCACGCTTGGGAGGCGATCAATTCG TCCTGGTCCTCTCGGGGATCGAGCAGCCCTACGAGGCCGCCGAGCTGGCGCAAACCCTGCTGGATGACCTGGAAACGCCGCTGGAAGTGGATGGCCAGCG TATCCGTCTGCACGGCACCATCGGCGTCACGCTGTACCCGGAAGACGGCGGCGATACCGAGAAGCTGCTGCAGAAGGCCGAGCAAACCATGACGCTGGCC AAGAACCGCTCGCGCAATCGCTACCAGTTCTACGTCGCCAGCATCGACAGCGAAATGCGCGCGCGTCGCGAGCTGGAGAAGGACCTCGGCGAGGCGCTGG CGCATGGCGAGTTCTTCCTCGTCTACCAGCCGCAGGTGGATTACCAGCAGAACTGCATCACCGGTGTCGAAGCGCTGCTGCGCTGGAAGCACCGGGGCAA GCTGGTGCCGCCCGACCTGTTCATCCCGGTGGCCGAGCAGAACGGCAGCATCATTCCGATCGGCGCCTGGGTGCTCGACCAGGCCTGCCGCCAGCTGCAG GAATGGCGCGGGCTCGGTTTCACCGGCTTGCGCATGGCCGTCAACCTGTCGACCGTCCAGCTGCACCACAGCGGCCTGCCGCAGATGATCAGCGACCTGC TGCAGAGGCATCAGCTACCGGCCGAAACCCTGGAACTGGAAGTCACCGAAACCGGACTGATGGAAGATATCCAGGCGGCCCGGCACAACCTGCTGAGCCT GCGGCGATCCGGTGCGCTGATCGCCATCGACGACTTCGGCACCGGCTATTCCTCGCTCAGCTACCTCAAGAGCCTGCCGCTGGACAAGATCAAGATCGAC AAGAGTTTCGTCCAGGACATCGGCCAGGACGAAGGCGCCACCATCGTTCGCGCAGTCATCCAGCTGGGCCGCAGCCTGGGCATGACGGTAATTGCCGAAG GCGTGGAGACGCCCGAGCAGGAAGCCTACCTGATCGCCGAGGGCTGCCAGGAAGGCCAGGGTTATTACTACAGCAAGCCGCTGCCGGCACGGGAAATGAC CGCGCTCCTACAGCAGTCCCGCCACTTCACCCGTACGCTCAGTTCGATCCAGCCGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCTGCAGTCGCTACCAGCTACTCACGCCCAACTGCAGGGCCAGCCACAGCGCACCGCCGAGGCAGGCCAGCGCGGCGGCCGCGGCCTGCCAGTAGAAGC GCCGGGCGAGCACCTCCTCGCCGTGGCTGGAGAGCACGAACGGTTGCGCCTGCTGCGGGCGCGTCAGGTGCGCGATTGCCGGCGCACTGCTCGCCGTGCG GTGGCGGTCTTCCGCCTCCAGCCCGGCCGCCAGCCTGACGCGATGCCACTCCTGCTCGTCGAGCCGGCCATCGCCGTCGCGGTCGAAACGCCGCAACAGG CCGGCAAAATCGCCTTTCCACTGGCGGATCACCTCCGCCTGCGCCCGCTGCTGATCAAGCCCCTGACGACCGCCCCCGAAGGTACGAAACTCGCCGATGG CATACAGCGGCTCGCCTGCGTGCAGGCGTTCCTCGACGTAGCGGTACTGCCGACCGCCGTTCAGCCAATCCAGCCAGCCGTGGGTCGGCAGCCCGCGTGG
Amino Acid Sequence
>diguanylate cyclase
MKLELRNSLSRRLLRVVLLSALAVGLVLSCAQIIFGAYKTRHLIADDAQRILRMTRDPSTQAIYSLDREMGSQVMEGLFQHESIREASIGHAGEELLAHK SRPLLTLPSRWLTDPILGRDQQFSIPLIGREPYNEHYGDLRITLDTARYGQEFISDSVVIAVIGVLRALTLGLVLFLIYEWLLTRPLTKLIEHLARINPD RPGAHKLPLIKGHERNELGLWVETANGLLAAIEHNMQLRQQAENSLQHMTQYDPLTGLPNRQQLQRQLDHILEEARRLQRRVAVLCLGLDDFKGINEQFS YRTGDRLLLALADRLRSLGGRLDALARLGGDQFVLVLSGIEQPYEAAELAQTLLDDLETPLEVDGQRIRLHGTIGVTLYPEDGGDTEKLLQKAEQTMTLA KNRSRNRYQFYVASIDSEMRARRELEKDLGEALAHGEFFLVYQPQVDYQQNCITGVEALLRWKHRGKLVPPDLFIPVAEQNGSIIPIGAWVLDQACRQLQ EWRGLGFTGLRMAVNLSTVQLHHSGLPQMISDLLQRHQLPAETLELEVTETGLMEDIQAARHNLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKID KSFVQDIGQDEGATIVRAVIQLGRSLGMTVIAEGVETPEQEAYLIAEGCQEGQGYYYSKPLPAREMTALLQQSRHFTRTLSSIQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site