Pseudomonas sp. HMP271, DP64_RS10045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGGCCCGCGAGCTATATGCCATGGGCTGCTACGAGGTTTCCCTGGGCGACACCATCGGCACCGGCACACCGGGCAAGACCCGCACCCTGTTCGATACCG TAGCCCGCGAAGTGCCGCGCGAACGGTTGGCCGGGCATTTCCACGACACCTACGGCCAGGCGCTGGCGAATATCTATGCGAGCCTCTTGGAAGGCATCGC CGTGTTCGACAGCTCGGTCGCCGGCCTCGGCGGTTGCCCCTACGCCAAAGGCGCCAGCGGCAATGTCGCCAGCGAAGACGTGCTGTACATGTTCAACGGG CTGGACATAGCCACCGGCATCGACCTCGATGCGCTGATCGCATCTGGCGACCGCATCAGCCGCGTGCTGGGCCGTGTCAACGGCTCGCGGGTGGCGCGCG CCCGCCATGCAGGCTGATCGGCATCGTTGTTGCATTGACGCATTCAGCCCGTGGCCGGTTCAGCCGCGGGCACGGACACAACAATAAGTAGAGGTATTTC
DNA Sequence for Gene
>DP64_RS10045
ATGAACAAGCTCTACCCCAGCGCTGCCCACGCCCTGGAAGGCCTGGTCGAGGACGGCATGACACTCGCCGTCGGCGGCTTCGGCCTGTGCGGCATCCCCG AAGCGTTGATCGCCGCCTTGCGCGACTCCGGCAAGAAGAACCTTACCGCCATCAGCAACAACGCCGGCGTCGACGGCTTCGGCCTCGGCCTGCTGCTGGA GACGCGGCAGATCAGCAAGATGATTTCCTCCTACGTGGGTGAGAACAAGGAGTTCGAACGCCAGTACCTGGCCGGCGAGCTGCAGCTGGAGTTCACCCCG CAAGGCACGCTGGCCGAGAAGCTGCGTGCCGGCGGCGCGGGCATCCCGGCGTTCTACACCAGGACCGGCTACGGCACGCTGGTGGCCGAGGGCAAGGAAA CCCGCCAGTTCAACGGCGAGTGGTACGTGATGGAGGAATCGCTGACCGCCGATATCGCGCTGGTCAAGGCCTGGAAGGCCGACAAGGCCGGCAACCTGCT GTTTCGCAAGACCGCGCGCAACTTCAACCCGCTGGCGGCGATGGCCGGCAAGGTCTGCGTCGTCGAGGTGGAGGAGATCGTCGAGACCGGCGAGCTGGAC CCGGACCAGATCCATCTGCCGGGCATCTATGTGCAACGCATCGTGCACAACCCGAGCCCGGAAAAGCGCATCGAAAAACGCACGGTGAGGAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACCATGGCCTGGACACGTGAACAGATGGCGCAACGCGCCGCCCAGGAGCTGCAGGACGGCTTCTACGTCAACCTCGGTATCGGCCTGCCGACCCTGGTC GCCAACTACATCCCCGAAGGCATGGACGTCTGGCTGCAGAGCGAGAACGGCCTGCTCGGCATCGGCCCCTTCCCCAGCGAGGAAGAGATCGATCCGGACC TGATCAACGCCGGCAAGCAGACCGTCACCGCCCTGCCCGGCTCGAGCTTCTTCGACAACGCGCAGAGCTTCGCCATGATCCGCGGCGGCCACATCAACCT GGCCATCCTCGGCGCCATGCAGGTGTCGGAAAAAGGCGACCTGGCCAACTGGATGATCCCCGGCAAGATGGTCAAGGGCATGGGTGGTGCGATGGACCTG GTGGCCGGCGTCAAGCGCGTCGTGGTGCTGATGGAGCACACCGCCAAGGGCGATGCGCACAAGATCCTGCCGGCCTGCGACCTACCGCTGACCGGCGTCG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MNKLYPSAAHALEGLVEDGMTLAVGGFGLCGIPEALIAALRDSGKKNLTAISNNAGVDGFGLGLLLETRQISKMISSYVGENKEFERQYLAGELQLEFTP QGTLAEKLRAGGAGIPAFYTRTGYGTLVAEGKETRQFNGEWYVMEESLTADIALVKAWKADKAGNLLFRKTARNFNPLAAMAGKVCVVEVEEIVETGELD PDQIHLPGIYVQRIVHNPSPEKRIEKRTVRS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site