Pseudomonas sp. HMP271, DP64_RS09775

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACCTCGGAGCTGAAGACCGCGTTCCAGATCGGTTTCATGATCTTCATTCCGTTCCTGATCATCGACATGGTGGTGGCCAGCGTGCTGATGGCGATGGGC ATGATGATGCTCTCGCCGCTGATCATCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTCGACGGCTGGGGGCTGATCATCGGCACCCTGGCCGGCA GCTTCGGCACGCTCTAGGAGGCTCGTCATGACGCCCGAAGTCGCGGTGGACCTGTTTCGCGAAGGCCTGTGGATGACCGCGATGATCGTCGGCGTGCTGG TGATGCCGAGCCTGCTGGTCGGTCTGGTGGTGGCCATGTTCCAGGCTGCCACGCAGATCAACGAGCAGACCCTGAGCTTTCTGCCGCGCCTCCTGGTGAT GCTGCTGACGCTGATCTGGGCCGGGCCTTGGCTGGTGCGCGAGCTGATGGAGTATACCCAGGGGCTGATCACCAACATTCCGCTGATCATCGGCTGAACC
DNA Sequence for Gene
>DP64_RS09775
ATGCTGGAACTGAGCAATGCGCAGATCGGCAGCTGGGTGGCGCAGTTTCTGCTCCCGCTGTTCCGTATCGCCGCGTTGCTGATGAGCATGCCGATCATCG GCACGCAGCTGGTGCCGCCGCGGGTACGGCTGTATCTGGCGCTGGCCATCACCCTGGTGCTGGCGCCGACCCTAGGCCCGATGCCACTGGTCGAGGCGCT GAGCCTGCGTGCCTTGCTGCTGATCGCCGAGCAGATTCTGATCGGTGTGATGCTCGGTTTCGTCCTGCAGCTGTTCTTTCAGGTGTTCATCGTCTCCGGG CAGCTGCTGGCGATGCAGATGGGCCTGGGGTTCGCCTCGATGGTCGATCCGGCCAACGGTGTGTCGGTGCCGGTGCTCGGCCAGTTCTTCAATATGCTGG TGATCCTGCTGTTCCTGGCGATGAACGGTCATCTGGTGGTGCTGGAAATTCTCACCGAGAGCTTTGTGACCTTGCCGGTGGGCGGTGGGCTGTCGACCAA TCATCTGTGGGAGGTGGCGAGCAAGCTCGGCTGGGTGCTCGGCGCCGGCCTGCTGCTGGTGCTGCCGGCGATCACCGCGCTGCTGGTGGTGAACCTGGCG TTTGGCCTGATGACCCGCGCCGCCCCGCAGCTGAATATCTTTTCCATCGGCTTTCCGCTGACCCTGGTGCTGGGCCTGGTCATCGTCTGGATCGGGATGG CCGATATCCTCGCGCAATACCAGATCTTCGTCGGCGAAGCGCTGGCGATGCTGCGCGAGCTGGTGGGGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAATAGACTCATGCACAACGCGGAGGCCGTCGATGGCTGAAAGCGAAAGCGGTGCCGACAAAAGCGAGGAACCCACAGAGAAACGGCGCCGGGAATCTC GCGAGAAAGGCCAGATCGCGCGCTCGCGCGAGTTGAGCACGGTGGCCGTGACCATCGGCGGCATTGGCGGCCTGCTGGCGTCCGGCAGCGGGTTGGCGCA GGCGCTGATGGCCATGATGCAGGGCAGCTTCGAGCTGAGCCGCGAAACCCTGCTGGACGAGAGCAACATGGCGGTGTTGCTGGCGGCCAGCGGCAGGATC GCGCTGGAGGCAACCCTGCCGTTGCTGATCGCCTTGCTCATCGCCTCGATCGCCGGGCCCATCGCGCTGGGTGGCTGGCTGTTCTCCGCCAAGGCGATGG CGCCCAACTTCGGTCGGATGAACCCCGCTGCCGGGCTCAAGCGCATGTTCTCGACCAAGGCGCTGGTGGAGTTGCTCAAGGCCCTCGGCAAGTTCCTGGT
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MLELSNAQIGSWVAQFLLPLFRIAALLMSMPIIGTQLVPPRVRLYLALAITLVLAPTLGPMPLVEALSLRALLLIAEQILIGVMLGFVLQLFFQVFIVSG QLLAMQMGLGFASMVDPANGVSVPVLGQFFNMLVILLFLAMNGHLVVLEILTESFVTLPVGGGLSTNHLWEVASKLGWVLGAGLLLVLPAITALLVVNLA FGLMTRAAPQLNIFSIGFPLTLVLGLVIVWIGMADILAQYQIFVGEALAMLRELVGLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site