Strain | Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCTACAAGTCATCGGAAAAATTTCGCGACTCGCTCGATCGGCTGCTGCTTAAGCTGCCGATCGTTGGAGATATTCTCTACAAGTCGGTAGTGGCGCGTTA CGCGCGAACACTGTCTACCACGTTCGCGGCGGGTGTACCGCTGGTGGATGCGCTGGATTCGGTCGCCGGCGCCACGGGTAACGTGGTGTTTCGCAATGCG GTGGCGAAGATCCGTAGCGATGTTTCGTCGGGCGTTCAGCTCAATTTCTCCATGCGTACCACTGGGATCTTCCCAACGATGGCCATTCAGATGACGGCAA TCGGCGAGGAGTCCGGCGCGCTGGATGAAATGCTGGATAAGCTGGCGAGCTTCTACGAGGCCGAGGTCGATAACATGGTGGACAACCTGACCACCCTGAT GGAGCCGATGATTATGGCTGTCCTGGGTGTGTTGGTTGGGGGGTTGATCATTGCGATGTACTTGCCGATCTTCCAGTTGGGCAGCGTGGTCGGCTAATCG
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DNA Sequence for Gene |
>DP64_RS03805
ATGATGCTTGAATTTCTGGCCAGCCATGCGCTGGCCTTTGTTTTGTGTGCGGTGCTGCTTGGGCTGTTGGTAGGCAGCTTTCTCAATGTCGTCATCTATC GTCTTCCGATCATGATGCAGCGCGAGTGGCAGGCGCAGGCGCGGGAGTTTCTGGAGCTGCCGGCCGAGTCGGCTGAGGCGACGTTCAACCTATTCCTGCC TCCTTCGCGATGCCCGCATTGCGCACATTCGATTCGGCCATGGGAGAACATTCCGGTACTGAGCTGGATGGCGCTGCGGGGCAGATGTTCGTCTTGCAAG AAGCCTATCCCTGCTCGTTATCCGCTGGTTGAGTTTGCTTGCGGGCTTCTCTCGGGTTACGTGGCCTGGCACTTTGGCTTTACTTGGCAGGCTGGCGCCA TGCTATTGCTGACTTGGGGGCTGCTGGCGATGAGCCTAATCGATATCGATCATCAGCTATTGCCGGATTCGCTGGTGCTGCCGCTGCTCTGGTTGGGGCT AATCGTTAATAGTGGTGACCTTTTTGTGCTGCTGGGAGACGCCCTGTGGGGAGCGATCGCCGGATACCTAAGCCTGTGGACGGTTTACTGGCTCTTCAAG CTGGTTACCGGCAAGGAAGGCATGGGGTACGGCGACTTCAAGCTGCTTGCGATGATTGGCGCCTGGGGAGGCTGGCAAGTGCTGCCGCTCACCATTCTGT TGTCCTCGCTGGTGGGGGCGGTGCTTGGCAGCGTCCTGCTGCGCGTGCGCGGTGCTGCGCACGGCACGCCGATTCCTTTCGGGCCTTATCTGGCCATTGC CGGGTGGATCGCGTTGCTGTGGGGTGATCCCATTACTCGTGGCTATTTGCAGTTCGCGCATATATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGCGCTGCTTTAATGGTGGGCCGCAAGGCTGGCTGCGGCTTGCACTGGGCGCGGTGATTGAGTACTACTGCGAAACCATTGATTTGCGTGGATGTGT TGATGAGGCCTTGGATTCTCGGCTTGACCGGCGGTATTGGCAGCGGCAAGACTGCGGCGGCCAATCACTTCGCTAGTCTCGGCATACATGTGGTGGACGC CGATCAGGCTGCTCGTTGGGTGGTGGAGCCGGGGCGTCCGGCGTTGCAGCAAATTGTCGAGCATTTCGGCGCGGGCATGCTGCATGAGGGAGCTTTGAAT CGAGCGGCGCTTCGCGAGCGGATCTTTGTGGATCCAAGTGAGCGCGTGTGGCTCGAGCGGTTGTTGCATCCGCTGATTCGTGCTGAGGTTGCCACACATC TGGCCAAGGCCGAATCGCCGTACGCGATCATGGTTTCGCCCTTGCTGGTGGAATCGGGGCAGTACCGGGAGGTCGATCGAGTGCTGGTGGTGGATGTTCC
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Amino Acid Sequence |
>methyltransferase
MMLEFLASHALAFVLCAVLLGLLVGSFLNVVIYRLPIMMQREWQAQAREFLELPAESAEATFNLFLPPSRCPHCAHSIRPWENIPVLSWMALRGRCSSCK KPIPARYPLVEFACGLLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDIDHQLLPDSLVLPLLWLGLIVNSGDLFVLLGDALWGAIAGYLSLWTVYWLFK LVTGKEGMGYGDFKLLAMIGAWGGWQVLPLTILLSSLVGAVLGSVLLRVRGAAHGTPIPFGPYLAIAGWIALLWGDPITRGYLQFAHI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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