Pseudomonas sp. HMP271, DP64_RS03275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACATGGCCACCATGCGCTCCGATGGGGCTGCCTTGTACAGGTTCCGAACAGAGGTGGTAGTCATGAACAACAAGAACTTTCTGCGCTCGCTGCTGGCGG TGGGTGTCCTGGGTATGTCCGGCTTGGTCCTGGCGCATGGTGATGTGACCCCGCAGGCGGTGGACACCAAGGGCCTGCCATCCCTTGGCGAGGAGTGGGC AGAAGAAAACCCCTATCGCGCCCCGAGCGAACACCATGATCTGGCCGTGCAGATCGGTTCGTCCGCCTACAACCAGAACTGCGCCCGTTGCCACGGCCTG GAAGCAATCTCCGGCGGTATCGCGCCCGATCTGCGCGATCTGGAAGCCAGCTACGACGGCGACGAGTGGTTCAAGGAGCGTGTGATCAACGGTGCGGTGC GCGACGGCGCGGTGTACATGCCGCGCATGGCCGACACCCTCAGCCAGGAAGCGCTGTGGGCGATCCGTACCTATATCGAAAGCGAAGCGGCCAAGCGGTG
DNA Sequence for Gene
>DP64_RS03275
ATGCGCCTCGGCCGCTGGCTCGTCGCGCTGTGCCTGTCGGCCTGCTGCGTACTGGCGCAGGCCGAGGTGGTGCGGGTGCGCGCTTACGACGACATCATCG CCTCGGGTGTGCTCAAGGTGGCGATGTACCAGGACTTCCCGCCATACAGCTTCGTCGTCGACGGTCAGCCTCGCGGCGTCGACGTGGAAATGGCGCGCGA GCTGGCGGATGGCCTCGGCCTCAAGCTGGAGGTGCTGTGGGTCGCGCCGGACGAAACGCTGGACGATGACTTGCGCAACTTCATCTGGAAGGGGCACTAC CTGCGCCCCAACGTGCTGGCCGACGTGATGCTGCGCGTGCCCTACGACCGCGAGTTCTCCTACAAGCGCAACGAGCTGGGCGAGCTGATCAATGAGCTGG TGGTGATGTTCGGGCCTTATCAGCGCGAACGCTGGCAGTCCGCCTTCGACGATCGCCGTCTGAAGGAGGTGCCGACCGTGGCGGTCTTCCAGTACCACCC GGTGGGCGTAGAGGTCGAGAGCGTGCCGTCGTTCTACCTGTCGTCGGTGTTCGGCGGGCGCATGAGCAAGATGCTGCACCACTATCCCAGCCCGCAGGCC GCGTTCGCCGCCATGCAGGCCGGTGAGGTGGACGCGACGATGGCCATGCGTGGGGAAATCGACTGGTTGCTCAAGCAGGCCAACGACAGCCATCTGAAGC TCGCGGAGAATGCCTACCCTGACATGGGCAAGCAGGTCTGGGATCTGGGCATGGCGGTGCACGAGTCCAACCGCCAGCTGGCCTACGCGCTGGAAGGCGT GCTGGAGCCGATGATCACCGAGGGGCGGTTGGCGAAGATCTATGCTGGCTATGGGCTGCGCTACGAGCTGCCCGGGCTTTATCAGGATTTAGAGAACGAG ATGGCGGCCGGCAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCATCCTTCAGCGGGCCGCCGGGCAACGCCCGAGGAGTTCGAGATGAGCATGCGCGTTCTGCTGTTGCTTCTGACGTTCGCCCAGGCCGGCAACCTGC TGGCTGGCGAACCCGATCCGCTGCAATCGGTGATGTGGGAACACCACCACCGCAACCTGCTCAACGGCGAGCCCTACGTGTTCGACGAGCGTGTGCAGGT ACAGGTCCCGCCGTTCGCCGAAGATGCCCGGCAGGTGCCGGTGCATATCGATGCACGCGCCCTCGGCGACGAGGTGGTGCGTATCGAGGCCTGGGCCGAT CTCAATCCGATTCCGCGCATCTTTACCTTCACGCCCGGCGAGCGCGTCGAGTCGCTGGTGGCCATCCGCATTCGCGTCGAACAGGCTACGCCGATCCGCG CGGCAGTGCTGACACGCGACGGCGTCTGGCATGTCGGCGGCGCCAAGGTCGATGCAGCCGGTGGCGGCTGCACGGCACCCAGCGTGGTGCGGGCCCAGCC
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MRLGRWLVALCLSACCVLAQAEVVRVRAYDDIIASGVLKVAMYQDFPPYSFVVDGQPRGVDVEMARELADGLGLKLEVLWVAPDETLDDDLRNFIWKGHY LRPNVLADVMLRVPYDREFSYKRNELGELINELVVMFGPYQRERWQSAFDDRRLKEVPTVAVFQYHPVGVEVESVPSFYLSSVFGGRMSKMLHHYPSPQA AFAAMQAGEVDATMAMRGEIDWLLKQANDSHLKLAENAYPDMGKQVWDLGMAVHESNRQLAYALEGVLEPMITEGRLAKIYAGYGLRYELPGLYQDLENE MAAGN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site