Pseudomonas sp. HMP271, DP64_RS16535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGATCATTCCAGCCTGGCCAGCCGTATCCGCCAGCAGCTGCGTCATCTGCCGGCGGAGCAGTGGCCCGATGCGGCGACGCTGGCGCAGCGCCTGTGCAT GTCTGCCTCGACGTTGCGCCGCCGGCTGGCCGAAGCGGGCCAGCCCTACCAGACCATCAAGGACGGACTGCGTCAGGAGATGGCCACGCAGTGGCTGGCC GATGCCAGCGTCAGCTACGGCGAGATCGCCGAGCGGCTCGGTTTCGCCGATGTCAGTTCGTTCTACAAGGCGTTTCGCAAGTGGACGGGTAGCAATCCCG GTCACTACCGCAACTTGATCCTGGCGCCGACACAGCGCTGACCGCACGCCCAGGCAGCGCCCGTCACCGGCGTGATTGCCCTTTGCCATTGGCCAAAACG CTCAGGCAGGTTGAGTAGATCGGCCATTGCCGCTCCCGTGTCGCTGTCTAAAGATGAATCCCGGCTTCGCACCGAATAACAACAAGCACGGGAGAGCGCC
DNA Sequence for Gene
>DP64_RS16535
ATGCAGATTCGCGACAGGGTATTCCTCATCAGCGGTGGTGCTTCGGGGCTTGGTGCCGCCGCGGCACAGGCGCTGGTCGAGGCGGGTGGCAGCGTGGTGC TGGCCGATCTCGACGAGGCGGCAGCCATCGCCCAGGCCGAAGCGCTCGGCGCCGGCGCACTCGGCGTGCGGGCCGACATCCGCGACGAACAGGCCGCGCG TCACGCGGTGACGACGGCCCGCCAGCACTTCGGTGCGCTGCACGGGTTGGTCAACTGCGCCGGGGTTGCCGGTGGCGAGAAAATCCTCGGCCGTAATGGC CCGCACGGCCTCGACAGTTTCAGCCGCATCGTCGGCATCAACCTGATCGGCAGTTTCAATATGCTGCGCCTGGCCGCAGAGGCAATGGCCGAGAACGCGC CGGATGCCAACGGCGAGCGCGGCGTGATCATCAATACCGCGTCCATCGCGGCCTTCGACGGACAGATCGGCCAGGCGGCCTATGCGGCCTCCAAGGGCGG TGTCGTCAGCCTGACGCTGCCGGCCGCCCGCGAGCTGGCGCGCTTCGGTATCCGTGTGATGACCATCGCCCCCGGCGTGTTCGAGACGCCGATGATGGCC GGCATGACCCAGGAAATCCGCGACTCGCTGGCCGCCGGCGTACCGTTCCCGCCCCGTCTGGGCCGCCCCGCCGAATACGCCGCGCTGGTGCGGCACATCT TCGAAAACAGCATGCTCAACGGTGAGGTGATCCGTCTCGACGGTGCCTTGCGCATGGCCGCCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGAAATGCACATGAAAGATGATCCGATCGTAATCGTCAGCAGCGCGCGCACGCCGATGGGCGGCTTCCAGGGTGACCTGCTGGGCATGACTGCGCCCCA GCTCGGTGCGGCAGCGATCCGCGCCGCGGTGGAACGCAGCGGCCTGCCGCCGGAGAACGTGCAGGACGTACTGATGGGCTGTGTGCTGCCGGCCGGACAG GGCCAGGCGCCGGCGCGGCAGGCGGCGCTGGGGGCGGGGCTGACCCGCGCCACCACCTGCACCACGGTGAACAAGATGTGCGGCTCGGGCATGCAGACGG TGATCCTGGCGCACGACCAGCTGCTTGCCGGCAGCGCCGACATCGTCGTTGCCGGCGGCATGGAGAGCATGTCCAACGCGCCGTATCTGCTCGACCGAGC CCGCGGCGGCTACCGCATGGGCCATGGCCGGGTGCTCGATCACATGTTCCTCGACGGTCTCGAGGACTCGTTCGACAAGGGTCGGCTGATGGGCTCGTTC
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIRDRVFLISGGASGLGAAAAQALVEAGGSVVLADLDEAAAIAQAEALGAGALGVRADIRDEQAARHAVTTARQHFGALHGLVNCAGVAGGEKILGRNG PHGLDSFSRIVGINLIGSFNMLRLAAEAMAENAPDANGERGVIINTASIAAFDGQIGQAAYAASKGGVVSLTLPAARELARFGIRVMTIAPGVFETPMMA GMTQEIRDSLAAGVPFPPRLGRPAEYAALVRHIFENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site