Pseudomonas sp. HMP271, DP64_RS15805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAGGGTGAACAGGGCGGCGGCCAGCAACGCGGTGACCATCACCGGTTTGCGGCCGATGGCATCGGAGATGGGCCCGGTGATCAGTAGGCCGATCGCCA GGGTGATGGTCGAGGATGATAGCACCAGGCTGCTTTGCGCCGCGTTGATGGCGAACGCCTGCGACAGCATGGGCATCAACGGTTGCACGCAGTAGAGCAG GGCGAAGGTCGCGAAGCCGCCAGCGAACAGCGCCAGCACGGTGCGGGTGAAGCGTGGCGTGCCCTTTTCGGTGAAGGCGTCGTGGGCCACGGCATCGGTG GAGGGCTGCGCGTGGGATTGAGCCGACTCGCCGGTCGCGCTCTGGAAACTGTTCATCGCCGATTCTCGCTGTCGTTCACCCGCTCGACACTCGGGCGTCG GGGTAGCAGGCTGATGAAGAGAACGATAGGGAGCTTTATTTAATGTTTCCAATATATTATTCGACCCAATCAATATGACTGGCGAATCAATGGGGTTGTC
DNA Sequence for Gene
>DP64_RS15805
ATGGAGCTACGCCACCTGCGGTATTTCGTCGCTGTGGCCGAGGAGCTGCACTTCGGCCGTGCAGCCGAGTTACTACGCATTTCCCAGCCGCCGCTGAGCC AGCAGATCCAGGCGCTGGAAGCCGAGCTGGGGGTGCGTCTGTTCGATCGCACCAACCGTCGGGTTTCGCTGACCGACGCCGGCCGGCTGTTCCTCGAGGA AACTCGCCGCACGCTGGCGCAGGTCGACAAGGCGGTGGATGTGGCGCGCCGCGCCAATCAGGGTGAGATCGGCGAGCTGCAGATCGGTTTCACCTCCTCG GCGCCGTTCACCTCGATTCTGCCGCGGGCGATTCTGGCCTTCCGCGAAGCCTTTCCGGCCGTGCACCTGGCGCTGCAGGAGATGACCAGCAAGCAGGTGG TGGACGCGGTGCAGGACGAGACGCTGCAGGTCGGTATGATCCGCCCGTTCGCGCTGCCGGCCGGCCTGCAGACCACGGAGCTGTTCAGCGAACCCCTGGT GGCGCTGATGCACGCCGGGCACCCGTTGGCGAGCGATAGAGAGGAGGGGATCTGGCTGGCCGAGTTGGCCGCCGAGCCTTTCGTGTTCTTTCCGCGCAGC TACGGCACCGGACTCTACGACCAGTTGCTCAACCTGGCGCGCCAAGCCGGCTTCAACCCGCGCATCGCCCAGGAGGCGAACGAGGCGCTGACCATCATCG GTCTGGTCGCTGCGGGGCTGGGGGTTTCGGTGCTGCCGGCGTCGTTCCAGCGTATCCGCATTGACGGTGTGGCATTTCGGACCGTGCTCGACAAGGAGGC GACCACCGCCGTCTGGCTGGTCAAGCGCCGTCAGGAGCAGTCACCGCTGACGCGCGCCTTCATCGACCTGGTCACGCGTGAGGCGCTTGCCGCCCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGTGCGGTGAGAGTCCGTGCCGGCTGAGGGCCGGCACGGAGCGCTCGATCAGTTGTAGCGATACTTCGCTTCGATCTTGCGCTTCTGCAGGGTGAACTGG GTCATGTCGATCTGGTTCTGTGCCAGCTGGTCTTCCAGCTTGTCCAGCTCGCCATTTTCCAACTTGCTGACGTGATGCTTGGTGGCGTGGTAGTTGATGG TTTCCGCGGCGCTGTGGCCACTGACCGGATCCCACAGAATGGAAAGCGGCCAGAACAGCAGGTTGACCACGCCAAGGCCGTACTCACGACCGTAGAACGA ACCACCGCCGGGAAGCAGACCCAGCGCGGTACCCAGCGCTGGGCTCTTTTCCTCGACCGCCAGGCCGGCGGCTTCGAAGTGGCGCAGCTCGGATTCCTGA TACGAATTCAGGCCGCTCGCGCAGCCGGTGGAAGCCAGGATCACACCAGCGAGAAGAATAGGGGTGAGTTTCACGACAGCTCCTTGTTGTCTGTTTTTCA
Amino Acid Sequence
>LysR family transcriptional regulator
MELRHLRYFVAVAEELHFGRAAELLRISQPPLSQQIQALEAELGVRLFDRTNRRVSLTDAGRLFLEETRRTLAQVDKAVDVARRANQGEIGELQIGFTSS APFTSILPRAILAFREAFPAVHLALQEMTSKQVVDAVQDETLQVGMIRPFALPAGLQTTELFSEPLVALMHAGHPLASDREEGIWLAELAAEPFVFFPRS YGTGLYDQLLNLARQAGFNPRIAQEANEALTIIGLVAAGLGVSVLPASFQRIRIDGVAFRTVLDKEATTAVWLVKRRQEQSPLTRAFIDLVTREALAAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site