Pseudomonas sp. HMP271, DP64_RS13560
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. HMP271 Pseudomonas_HMP271_contig_11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCCATGCCCATTACCAAAGCAACACCGTCGAGCAAGCAACTGATTCGCGCCTTCGAGCCCTACAAGGAAACCAAGGGCGAGGAATACATGAGCGACAA GATGCGCGCTCACTTCACCGGCATCCTCAACAAGTGGAAGCAGGAGTTGATGGAGGAAGTCGATCGCACCGTGCACCACATGCAGGACGAAGCGGCCAAC TTCCCCGATCCGGCCGACCGCGCCAGCCAGGAAGAAGAATTCAGCCTGGAACTGCGTGCTCGCGATCGCGAGCGCAAGCTGATCAAGAAGATCGACGAGA CGCTGCAGCTGATCGAAGACAACGAGTACGGCTGGTGCGACTCCTGCGGTGTCGAGATCGGCATCCGCCGGCTGGAAGCCCGCCCCACCGCCACGCTGTG CATCGACTGCAAGACGCTGGCGGAGATCAAGGAAAAGCAGATCGGTTCCTGATCCCGAACGGGGCGCTACGGCGCCCCGCTTCATTTCCAGCCCGCCGCC
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| DNA Sequence for Gene |
>DP64_RS13560
ATGACCTCACCCCGCCCCGCTGATCGTTACATCGGCCGCTTCGCGCCGACGCCCAGCGGTTATCTGCACTTCGGCTCGCTGTTTGCCGCTCTCGCCTCCT ACCTCGACGCCCGCGCCGTTGGCGGCGACTGGCTGCTGCGCATGGAAGACATCGATCCGCCACGGGAAATGCCCGGCGCTCAGGCCGCGATTGTCGAAAC CCTGCGCCGCTACGGTTTCGCGTGGGACGGCACCATGCTGCGCCAGAGCCAACGCCAGGCCGCCTACCAGGCGGCCGTCGAGCACTTGCTGGACGCCGGC CTGGCCTATGCCTGTACCTGCTCACGCAAGCAGCTGCAGGCATACCCCGGCGCTTATCCGGGTTTCTGCCGCGATGCCGGCCACGACCCGCGTGACGCCG CGATCCGCCTGCGCGTACCGGATCGCGAGTACCACTTCTGCGATCGCGTGCAGGGCGAGTACCGCCAGCACCTGGGCCGCGAGGTCGGTGACTTCGTCAT CCGTCGGCGCGACGGTCTGGTCGCCTATCAGCTTGCCGTGGTGCTCGACGATGCCTGGCAGGGCGTCACCGACGTGGTGCGCGGGGCCGATCTGCTCGAC TCCACACCGCGCCAGCTGTATCTGCAGGAACTGCTCGGTCTACCGCAGCCGCGCTATCTGCACCTGCCATTGATCATCCAGCCGGACGGCCACAAGCTGG GCAAGAGCTACCGCTCGCCACCGTTGCCCCCCGACGAGGCCAGCCCGTTGCTGTTGCGCGCGCTGCGCGCTCTTGGCCAGCAACCAGCCGCCGAACTCGC CGGCGCCCCGGCGGCAGCGATTCTCGCCTGGGCGGTCGCGCACTGGGACGCCGGGCGCATCCCGCGCACCCGCTCACTGGCCGAGGCGCAGCTGCGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCGACTCGCCGCCAACCTGCAGGTTTTGCCTGCCGCCGGTGGCTTGCCGCTTGCGGCTGCTCTACCATCGACGCACTTCCGACACGAGACCCGGCATG TACATCTACCGACTGGTGCTGCTTCTGGTGGTGGGGATCTATCTGTTTTCCCCGGCGATCATGGACTGGTGGATCGACCCCAACGGTGCCTGGTACCGAC CCTACCTGCTGTGGCTGATCCTCATCGTGGTGACCTTCATTCTCCAGAGCCAACGCGATGCAGACGAGCTTTAGCCTCAGCCACCTGGTGCTGATCAGCG CCGCCTACCTGCTGGCGCTGTTCGGCGTCGCCTGGGTCAGCGAGCGCGGCATCATCCCGCGTTGGATCATTCGCCATCCGCTCACCTACACCCTTTCGCT GGGCGTCTATGCCAGCGCCTGGGCCCTCTACGGCACCGTCGGGTTGGCCTATCAGTACGGCTACGGCTTTCTCGCCACCTACTTGGGGGTGTGCGGCGCG
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTSPRPADRYIGRFAPTPSGYLHFGSLFAALASYLDARAVGGDWLLRMEDIDPPREMPGAQAAIVETLRRYGFAWDGTMLRQSQRQAAYQAAVEHLLDAG LAYACTCSRKQLQAYPGAYPGFCRDAGHDPRDAAIRLRVPDREYHFCDRVQGEYRQHLGREVGDFVIRRRDGLVAYQLAVVLDDAWQGVTDVVRGADLLD STPRQLYLQELLGLPQPRYLHLPLIIQPDGHKLGKSYRSPPLPPDEASPLLLRALRALGQQPAAELAGAPAAAILAWAVAHWDAGRIPRTRSLAEAQLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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